Gene : Phvul.009G225300 P. vulgaris v2.1
Defline:  (1 of 4) PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Genomic Order:  2304
Name:  ? Phvul.009G225300 Secondary Identifier:  ? PAC:37151008
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G225300 0.5kb upstream 0.5kb upstream 2917 true Chr09: 33971336-33974252 Phaseolus vulgaris
Phvul.009G225300 0.5kb upstream 0.5kb upstream 500 false Chr09: 33973753-33974252 Phaseolus vulgaris
Phvul.009G225300 0.5kb downstream 0.5kb downstream 2917 true Chr09: 33970836-33973752 Phaseolus vulgaris
Phvul.009G225300 0.5kb downstream 0.5kb downstream 500 false Chr09: 33970836-33971335 Phaseolus vulgaris
Phvul.009G225300 1.0kb upstream 1.0kb upstream 3417 true Chr09: 33971336-33974752 Phaseolus vulgaris
Phvul.009G225300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 33973753-33974752 Phaseolus vulgaris
Phvul.009G225300 1.0kb downstream 1.0kb downstream 3417 true Chr09: 33970336-33973752 Phaseolus vulgaris
Phvul.009G225300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 33970336-33971335 Phaseolus vulgaris
Phvul.009G225300 2.0kb upstream 2.0kb upstream 4417 true Chr09: 33971336-33975752 Phaseolus vulgaris
Phvul.009G225300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 33973753-33975752 Phaseolus vulgaris
Phvul.009G225300 2.0kb downstream 2.0kb downstream 4417 true Chr09: 33969336-33973752 Phaseolus vulgaris
Phvul.009G225300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 33969336-33971335 Phaseolus vulgaris
Phvul.009G225300 5.0kb upstream 5.0kb upstream 7417 true Chr09: 33971336-33978752 Phaseolus vulgaris
Phvul.009G225300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 33973753-33978752 Phaseolus vulgaris
Phvul.009G225300 5.0kb downstream 5.0kb downstream 7417 true Chr09: 33966336-33973752 Phaseolus vulgaris
Phvul.009G225300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 33966336-33971335 Phaseolus vulgaris
Phvul.009G225300 10.0kb upstream 10.0kb upstream 12417 true Chr09: 33971336-33983752 Phaseolus vulgaris
Phvul.009G225300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 33973753-33983752 Phaseolus vulgaris
Phvul.009G225300 10.0kb downstream 10.0kb downstream 12417 true Chr09: 33961336-33973752 Phaseolus vulgaris
Phvul.009G225300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 33961336-33971335 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315145 5265 Fabidae View MSA
124071926 5270 Rosid View MSA
123747835 5271 Pentapetalae View MSA
122797679 5272 Eudicot View MSA
122046349 5273 Angiosperm View MSA
121349662 5274 Embryophyte View MSA
123381390 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.8043 0.0 100.539 High  
cufflinks 26.1725 0.0 68.7487    
cufflinks 8.21834 0.0 23.7358   Low
cufflinks 64.5179 0.0 167.612 High  
cufflinks 36.8019 0.0 95.5351 High  
cufflinks 22.202 0.0 58.9588    
cufflinks 80.7894 0.0 211.542 High High
cufflinks 76.2449 0.0 199.163 High High
cufflinks 32.0929 0.0 83.5118 High  
cufflinks 19.9732 0.0 53.4401    
cufflinks 38.9186 0.0 100.848 High  

0 Strain