Gene : Phvul.009G223700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22952:SF17 - CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B Genomic Order:  2288
Name:  ? Phvul.009G223700 Secondary Identifier:  ? PAC:37152037
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G223700 0.5kb upstream 0.5kb upstream 1709 true Chr09: 33700690-33702398 Phaseolus vulgaris
Phvul.009G223700 0.5kb upstream 0.5kb upstream 500 false Chr09: 33700690-33701189 Phaseolus vulgaris
Phvul.009G223700 0.5kb downstream 0.5kb downstream 1709 true Chr09: 33701190-33702898 Phaseolus vulgaris
Phvul.009G223700 0.5kb downstream 0.5kb downstream 500 false Chr09: 33702399-33702898 Phaseolus vulgaris
Phvul.009G223700 1.0kb upstream 1.0kb upstream 2209 true Chr09: 33700190-33702398 Phaseolus vulgaris
Phvul.009G223700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 33700190-33701189 Phaseolus vulgaris
Phvul.009G223700 1.0kb downstream 1.0kb downstream 2209 true Chr09: 33701190-33703398 Phaseolus vulgaris
Phvul.009G223700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 33702399-33703398 Phaseolus vulgaris
Phvul.009G223700 2.0kb upstream 2.0kb upstream 3209 true Chr09: 33699190-33702398 Phaseolus vulgaris
Phvul.009G223700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 33699190-33701189 Phaseolus vulgaris
Phvul.009G223700 2.0kb downstream 2.0kb downstream 3209 true Chr09: 33701190-33704398 Phaseolus vulgaris
Phvul.009G223700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 33702399-33704398 Phaseolus vulgaris
Phvul.009G223700 5.0kb upstream 5.0kb upstream 6209 true Chr09: 33696190-33702398 Phaseolus vulgaris
Phvul.009G223700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 33696190-33701189 Phaseolus vulgaris
Phvul.009G223700 5.0kb downstream 5.0kb downstream 6209 true Chr09: 33701190-33707398 Phaseolus vulgaris
Phvul.009G223700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 33702399-33707398 Phaseolus vulgaris
Phvul.009G223700 10.0kb upstream 10.0kb upstream 11209 true Chr09: 33691190-33702398 Phaseolus vulgaris
Phvul.009G223700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 33691190-33701189 Phaseolus vulgaris
Phvul.009G223700 10.0kb downstream 10.0kb downstream 11209 true Chr09: 33701190-33712398 Phaseolus vulgaris
Phvul.009G223700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 33702399-33712398 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026418 5273 Angiosperm View MSA
122302252 5265 Fabidae View MSA
124066387 5270 Rosid View MSA
123740019 5271 Pentapetalae View MSA
122786547 5272 Eudicot View MSA
121296320 5274 Embryophyte View MSA
123334502 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.47146 0.0 1.8096    
cufflinks 0.438389 0.0 1.69188 Low  
cufflinks 0.104777 0.0 0.45667 Low Low
cufflinks 0.137547 0.0 0.574883 Low Low
cufflinks 7.2559 0.0 20.6565   High
cufflinks 0.263036 0.0 1.05594 Low  
cufflinks 0.887253 0.0 3.19056    
cufflinks 0.302457 0.0 1.19745 Low  
cufflinks 0.513759 0.0 1.94334    
cufflinks 0.328657 0.0 1.2952    
cufflinks 6.51934 0.0 18.8323   High

0 Strain