Gene : Phvul.009G226800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31087:SF3 - PROTEIN LURP-ONE-RELATED 16-RELATED Genomic Order:  2317
Name:  ? Phvul.009G226800 Secondary Identifier:  ? PAC:37149394
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G226800 0.5kb upstream 0.5kb upstream 1859 true Chr09: 34118741-34120599 Phaseolus vulgaris
Phvul.009G226800 0.5kb upstream 0.5kb upstream 500 false Chr09: 34120100-34120599 Phaseolus vulgaris
Phvul.009G226800 0.5kb downstream 0.5kb downstream 1859 true Chr09: 34118241-34120099 Phaseolus vulgaris
Phvul.009G226800 0.5kb downstream 0.5kb downstream 500 false Chr09: 34118241-34118740 Phaseolus vulgaris
Phvul.009G226800 1.0kb upstream 1.0kb upstream 2359 true Chr09: 34118741-34121099 Phaseolus vulgaris
Phvul.009G226800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34120100-34121099 Phaseolus vulgaris
Phvul.009G226800 1.0kb downstream 1.0kb downstream 2359 true Chr09: 34117741-34120099 Phaseolus vulgaris
Phvul.009G226800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34117741-34118740 Phaseolus vulgaris
Phvul.009G226800 2.0kb upstream 2.0kb upstream 3359 true Chr09: 34118741-34122099 Phaseolus vulgaris
Phvul.009G226800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34120100-34122099 Phaseolus vulgaris
Phvul.009G226800 2.0kb downstream 2.0kb downstream 3359 true Chr09: 34116741-34120099 Phaseolus vulgaris
Phvul.009G226800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34116741-34118740 Phaseolus vulgaris
Phvul.009G226800 5.0kb upstream 5.0kb upstream 6359 true Chr09: 34118741-34125099 Phaseolus vulgaris
Phvul.009G226800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34120100-34125099 Phaseolus vulgaris
Phvul.009G226800 5.0kb downstream 5.0kb downstream 6359 true Chr09: 34113741-34120099 Phaseolus vulgaris
Phvul.009G226800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34113741-34118740 Phaseolus vulgaris
Phvul.009G226800 10.0kb upstream 10.0kb upstream 11359 true Chr09: 34118741-34130099 Phaseolus vulgaris
Phvul.009G226800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34120100-34130099 Phaseolus vulgaris
Phvul.009G226800 10.0kb downstream 10.0kb downstream 11359 true Chr09: 34108741-34120099 Phaseolus vulgaris
Phvul.009G226800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34108741-34118740 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308547 5265 Fabidae View MSA
124061056 5270 Rosid View MSA
123740400 5271 Pentapetalae View MSA
122786459 5272 Eudicot View MSA
122042677 5273 Angiosperm View MSA
121309998 5274 Embryophyte View MSA
123347607 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.6556 0.0 199.45 High High
cufflinks 2.36425 0.0 7.74195    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.85945 0.0 20.2135   High
cufflinks 0.0516558 0.0 0.242553 Low  
cufflinks 0.217034 0.0 0.881972 Low  
cufflinks 0.0310262 0.0 0.151951 Low  
cufflinks 0.0218841 0.0 0.110804 Low Low
cufflinks 0.0697303 0.0 0.315075 Low  
cufflinks 0.293957 0.0 1.17173 Low  
cufflinks 0.149653 0.0 0.63108 Low  

0 Strain