Gene : Phvul.009G228600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR34455:SF1 - EXPRESSED PROTEIN Genomic Order:  2335
Name:  ? Phvul.009G228600 Secondary Identifier:  ? PAC:37148668
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G228600 0.5kb upstream 0.5kb upstream 1347 true Chr09: 34361945-34363291 Phaseolus vulgaris
Phvul.009G228600 0.5kb upstream 0.5kb upstream 500 false Chr09: 34362792-34363291 Phaseolus vulgaris
Phvul.009G228600 0.5kb downstream 0.5kb downstream 1347 true Chr09: 34361445-34362791 Phaseolus vulgaris
Phvul.009G228600 0.5kb downstream 0.5kb downstream 500 false Chr09: 34361445-34361944 Phaseolus vulgaris
Phvul.009G228600 1.0kb upstream 1.0kb upstream 1847 true Chr09: 34361945-34363791 Phaseolus vulgaris
Phvul.009G228600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34362792-34363791 Phaseolus vulgaris
Phvul.009G228600 1.0kb downstream 1.0kb downstream 1847 true Chr09: 34360945-34362791 Phaseolus vulgaris
Phvul.009G228600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34360945-34361944 Phaseolus vulgaris
Phvul.009G228600 2.0kb upstream 2.0kb upstream 2847 true Chr09: 34361945-34364791 Phaseolus vulgaris
Phvul.009G228600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34362792-34364791 Phaseolus vulgaris
Phvul.009G228600 2.0kb downstream 2.0kb downstream 2847 true Chr09: 34359945-34362791 Phaseolus vulgaris
Phvul.009G228600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34359945-34361944 Phaseolus vulgaris
Phvul.009G228600 5.0kb upstream 5.0kb upstream 5847 true Chr09: 34361945-34367791 Phaseolus vulgaris
Phvul.009G228600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34362792-34367791 Phaseolus vulgaris
Phvul.009G228600 5.0kb downstream 5.0kb downstream 5847 true Chr09: 34356945-34362791 Phaseolus vulgaris
Phvul.009G228600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34356945-34361944 Phaseolus vulgaris
Phvul.009G228600 10.0kb upstream 10.0kb upstream 10847 true Chr09: 34361945-34372791 Phaseolus vulgaris
Phvul.009G228600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34362792-34372791 Phaseolus vulgaris
Phvul.009G228600 10.0kb downstream 10.0kb downstream 10847 true Chr09: 34351945-34362791 Phaseolus vulgaris
Phvul.009G228600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34351945-34361944 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300070 5265 Fabidae View MSA
124072175 5270 Rosid View MSA
123739685 5271 Pentapetalae View MSA
122793757 5272 Eudicot View MSA
122041544 5273 Angiosperm View MSA
121346235 5274 Embryophyte View MSA
123428099 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.2943 0.0 83.7492    
cufflinks 122.814 0.0 321.563 High  
cufflinks 1715.46 0.0 6777.72 High High
cufflinks 46.8608 0.0 122.202 High  
cufflinks 93.6876 0.0 242.552 High  
cufflinks 430.591 0.0 1274.88 High  
cufflinks 0.280414 0.0 1.1706 Low Low
cufflinks 0.0817595 0.0 0.383793 Low Low
cufflinks 0.364411 0.0 1.489 Low Low
cufflinks 27.145 0.0 73.4728    
cufflinks 43.5215 0.0 114.04 High  

0 Strain