Gene : Phvul.009G228700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED Genomic Order:  2336
Name:  ? Phvul.009G228700 Secondary Identifier:  ? PAC:37150542
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G228700 0.5kb upstream 0.5kb upstream 3529 true Chr09: 34367657-34371185 Phaseolus vulgaris
Phvul.009G228700 0.5kb upstream 0.5kb upstream 500 false Chr09: 34370686-34371185 Phaseolus vulgaris
Phvul.009G228700 0.5kb downstream 0.5kb downstream 3529 true Chr09: 34367157-34370685 Phaseolus vulgaris
Phvul.009G228700 0.5kb downstream 0.5kb downstream 500 false Chr09: 34367157-34367656 Phaseolus vulgaris
Phvul.009G228700 1.0kb upstream 1.0kb upstream 4029 true Chr09: 34367657-34371685 Phaseolus vulgaris
Phvul.009G228700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34370686-34371685 Phaseolus vulgaris
Phvul.009G228700 1.0kb downstream 1.0kb downstream 4029 true Chr09: 34366657-34370685 Phaseolus vulgaris
Phvul.009G228700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34366657-34367656 Phaseolus vulgaris
Phvul.009G228700 2.0kb upstream 2.0kb upstream 5029 true Chr09: 34367657-34372685 Phaseolus vulgaris
Phvul.009G228700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34370686-34372685 Phaseolus vulgaris
Phvul.009G228700 2.0kb downstream 2.0kb downstream 5029 true Chr09: 34365657-34370685 Phaseolus vulgaris
Phvul.009G228700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34365657-34367656 Phaseolus vulgaris
Phvul.009G228700 5.0kb upstream 5.0kb upstream 8029 true Chr09: 34367657-34375685 Phaseolus vulgaris
Phvul.009G228700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34370686-34375685 Phaseolus vulgaris
Phvul.009G228700 5.0kb downstream 5.0kb downstream 8029 true Chr09: 34362657-34370685 Phaseolus vulgaris
Phvul.009G228700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34362657-34367656 Phaseolus vulgaris
Phvul.009G228700 10.0kb upstream 10.0kb upstream 13029 true Chr09: 34367657-34380685 Phaseolus vulgaris
Phvul.009G228700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34370686-34380685 Phaseolus vulgaris
Phvul.009G228700 10.0kb downstream 10.0kb downstream 13029 true Chr09: 34357657-34370685 Phaseolus vulgaris
Phvul.009G228700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34357657-34367656 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122304321 5265 Fabidae View MSA
124069991 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0916417 0.0 0.380139 Low  
cufflinks 0.190649 0.0 0.747767 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.15888 0.0 0.636981 Low  
cufflinks 0.0837189 0.0 0.353081 Low  
cufflinks 0.280133 0.0 1.06523 Low High
cufflinks 0.053349 0.0 0.233381 Low  
cufflinks 0.0371864 0.0 0.167484 Low Low
cufflinks 0.0391559 0.0 0.176925 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.164676 0.0 0.656111 Low  

0 Strain