Gene : Phvul.009G228800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED Genomic Order:  2337
Name:  ? Phvul.009G228800 Secondary Identifier:  ? PAC:37149963
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G228800 0.5kb upstream 0.5kb upstream 3917 true Chr09: 34371984-34375900 Phaseolus vulgaris
Phvul.009G228800 0.5kb upstream 0.5kb upstream 500 false Chr09: 34375401-34375900 Phaseolus vulgaris
Phvul.009G228800 0.5kb downstream 0.5kb downstream 3917 true Chr09: 34371484-34375400 Phaseolus vulgaris
Phvul.009G228800 0.5kb downstream 0.5kb downstream 500 false Chr09: 34371484-34371983 Phaseolus vulgaris
Phvul.009G228800 1.0kb upstream 1.0kb upstream 4417 true Chr09: 34371984-34376400 Phaseolus vulgaris
Phvul.009G228800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34375401-34376400 Phaseolus vulgaris
Phvul.009G228800 1.0kb downstream 1.0kb downstream 4417 true Chr09: 34370984-34375400 Phaseolus vulgaris
Phvul.009G228800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34370984-34371983 Phaseolus vulgaris
Phvul.009G228800 2.0kb upstream 2.0kb upstream 5417 true Chr09: 34371984-34377400 Phaseolus vulgaris
Phvul.009G228800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34375401-34377400 Phaseolus vulgaris
Phvul.009G228800 2.0kb downstream 2.0kb downstream 5417 true Chr09: 34369984-34375400 Phaseolus vulgaris
Phvul.009G228800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34369984-34371983 Phaseolus vulgaris
Phvul.009G228800 5.0kb upstream 5.0kb upstream 8417 true Chr09: 34371984-34380400 Phaseolus vulgaris
Phvul.009G228800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34375401-34380400 Phaseolus vulgaris
Phvul.009G228800 5.0kb downstream 5.0kb downstream 8417 true Chr09: 34366984-34375400 Phaseolus vulgaris
Phvul.009G228800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34366984-34371983 Phaseolus vulgaris
Phvul.009G228800 10.0kb upstream 10.0kb upstream 13417 true Chr09: 34371984-34385400 Phaseolus vulgaris
Phvul.009G228800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34375401-34385400 Phaseolus vulgaris
Phvul.009G228800 10.0kb downstream 10.0kb downstream 13417 true Chr09: 34361984-34375400 Phaseolus vulgaris
Phvul.009G228800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34361984-34371983 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122304321 5265 Fabidae View MSA
124069991 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.683446 0.0 2.35708    
cufflinks 0.1644 0.0 0.644811 Low Low
cufflinks 0.62445 0.0 2.16956    
cufflinks 0.62986 0.0 2.22166    
cufflinks 0.77284 0.0 2.66104    
cufflinks 0.190348 0.0 0.737729 Low Low
cufflinks 0.378537 0.0 1.38795 Low  
cufflinks 0.199344 0.0 0.766234 Low Low
cufflinks 0.168602 0.0 0.661797 Low Low
cufflinks 0.47384 0.0 1.70289    
cufflinks 1.03297 0.0 3.43209   High

0 Strain