Gene : Phvul.009G213500 P. vulgaris v2.1
Defline:  (1 of 6) KOG4660 - Protein Mei2, essential for commitment to meiosis, and related proteins Genomic Order:  2187
Name:  ? Phvul.009G213500 Secondary Identifier:  ? PAC:37150376
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G213500 0.5kb upstream 0.5kb upstream 7336 true Chr09: 32278065-32285400 Phaseolus vulgaris
Phvul.009G213500 0.5kb upstream 0.5kb upstream 500 false Chr09: 32284901-32285400 Phaseolus vulgaris
Phvul.009G213500 0.5kb downstream 0.5kb downstream 7336 true Chr09: 32277565-32284900 Phaseolus vulgaris
Phvul.009G213500 0.5kb downstream 0.5kb downstream 500 false Chr09: 32277565-32278064 Phaseolus vulgaris
Phvul.009G213500 1.0kb upstream 1.0kb upstream 7836 true Chr09: 32278065-32285900 Phaseolus vulgaris
Phvul.009G213500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32284901-32285900 Phaseolus vulgaris
Phvul.009G213500 1.0kb downstream 1.0kb downstream 7836 true Chr09: 32277065-32284900 Phaseolus vulgaris
Phvul.009G213500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32277065-32278064 Phaseolus vulgaris
Phvul.009G213500 2.0kb upstream 2.0kb upstream 8836 true Chr09: 32278065-32286900 Phaseolus vulgaris
Phvul.009G213500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32284901-32286900 Phaseolus vulgaris
Phvul.009G213500 2.0kb downstream 2.0kb downstream 8836 true Chr09: 32276065-32284900 Phaseolus vulgaris
Phvul.009G213500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32276065-32278064 Phaseolus vulgaris
Phvul.009G213500 5.0kb upstream 5.0kb upstream 11836 true Chr09: 32278065-32289900 Phaseolus vulgaris
Phvul.009G213500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32284901-32289900 Phaseolus vulgaris
Phvul.009G213500 5.0kb downstream 5.0kb downstream 11836 true Chr09: 32273065-32284900 Phaseolus vulgaris
Phvul.009G213500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32273065-32278064 Phaseolus vulgaris
Phvul.009G213500 10.0kb upstream 10.0kb upstream 16836 true Chr09: 32278065-32294900 Phaseolus vulgaris
Phvul.009G213500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32284901-32294900 Phaseolus vulgaris
Phvul.009G213500 10.0kb downstream 10.0kb downstream 16836 true Chr09: 32268065-32284900 Phaseolus vulgaris
Phvul.009G213500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32268065-32278064 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301511 5265 Fabidae View MSA
124070697 5270 Rosid View MSA
123742747 5271 Pentapetalae View MSA
122790656 5272 Eudicot View MSA
122046882 5273 Angiosperm View MSA
121349156 5274 Embryophyte View MSA
123428382 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.2711 0.0 84.3602   High
cufflinks 25.2367 0.0 66.8019    
cufflinks 21.9632 0.0 57.7115    
cufflinks 9.20288 0.0 23.9319   Low
cufflinks 18.2796 0.0 47.4905    
cufflinks 17.6803 0.0 45.9724    
cufflinks 20.1964 0.0 52.7731    
cufflinks 15.5186 0.0 40.2454    
cufflinks 22.2307 0.0 58.254    
cufflinks 26.4366 0.0 70.1546    
cufflinks 15.2915 0.0 39.5698    

0 Strain