Gene : Phvul.009G213600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR32227:SF127 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  2188
Name:  ? Phvul.009G213600 Secondary Identifier:  ? PAC:37150474
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G213600 0.5kb upstream 0.5kb upstream 2907 true Chr09: 32298212-32301118 Phaseolus vulgaris
Phvul.009G213600 0.5kb upstream 0.5kb upstream 500 false Chr09: 32300619-32301118 Phaseolus vulgaris
Phvul.009G213600 0.5kb downstream 0.5kb downstream 2907 true Chr09: 32297712-32300618 Phaseolus vulgaris
Phvul.009G213600 0.5kb downstream 0.5kb downstream 500 false Chr09: 32297712-32298211 Phaseolus vulgaris
Phvul.009G213600 1.0kb upstream 1.0kb upstream 3407 true Chr09: 32298212-32301618 Phaseolus vulgaris
Phvul.009G213600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32300619-32301618 Phaseolus vulgaris
Phvul.009G213600 1.0kb downstream 1.0kb downstream 3407 true Chr09: 32297212-32300618 Phaseolus vulgaris
Phvul.009G213600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32297212-32298211 Phaseolus vulgaris
Phvul.009G213600 2.0kb upstream 2.0kb upstream 4407 true Chr09: 32298212-32302618 Phaseolus vulgaris
Phvul.009G213600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32300619-32302618 Phaseolus vulgaris
Phvul.009G213600 2.0kb downstream 2.0kb downstream 4407 true Chr09: 32296212-32300618 Phaseolus vulgaris
Phvul.009G213600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32296212-32298211 Phaseolus vulgaris
Phvul.009G213600 5.0kb upstream 5.0kb upstream 7407 true Chr09: 32298212-32305618 Phaseolus vulgaris
Phvul.009G213600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32300619-32305618 Phaseolus vulgaris
Phvul.009G213600 5.0kb downstream 5.0kb downstream 7407 true Chr09: 32293212-32300618 Phaseolus vulgaris
Phvul.009G213600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32293212-32298211 Phaseolus vulgaris
Phvul.009G213600 10.0kb upstream 10.0kb upstream 12407 true Chr09: 32298212-32310618 Phaseolus vulgaris
Phvul.009G213600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32300619-32310618 Phaseolus vulgaris
Phvul.009G213600 10.0kb downstream 10.0kb downstream 12407 true Chr09: 32288212-32300618 Phaseolus vulgaris
Phvul.009G213600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32288212-32298211 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309743 5265 Fabidae View MSA
124069685 5270 Rosid View MSA
123748729 5271 Pentapetalae View MSA
122795839 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.34854 0.0 4.71281    
cufflinks 2.97366 0.0 9.48492    
cufflinks 3.63293 0.0 11.2611    
cufflinks 2.76493 0.0 8.82948    
cufflinks 7.91512 0.0 22.5727   High
cufflinks 2.108 0.0 6.96596    
cufflinks 4.60882 0.0 13.9201    
cufflinks 1.39826 0.0 4.8298    
cufflinks 4.90689 0.0 14.6566    
cufflinks 0.415775 0.0 1.61267   Low
cufflinks 11.5106 0.0 31.8744   High

0 Strain