Gene : Phvul.009G216800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11827 - SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS Genomic Order:  2219
Name:  ? Phvul.009G216800 Secondary Identifier:  ? PAC:37149570
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G216800 0.5kb upstream 0.5kb upstream 16898 true Chr09: 32662225-32679122 Phaseolus vulgaris
Phvul.009G216800 0.5kb upstream 0.5kb upstream 500 false Chr09: 32678623-32679122 Phaseolus vulgaris
Phvul.009G216800 0.5kb downstream 0.5kb downstream 16898 true Chr09: 32661725-32678622 Phaseolus vulgaris
Phvul.009G216800 0.5kb downstream 0.5kb downstream 500 false Chr09: 32661725-32662224 Phaseolus vulgaris
Phvul.009G216800 1.0kb upstream 1.0kb upstream 17398 true Chr09: 32662225-32679622 Phaseolus vulgaris
Phvul.009G216800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32678623-32679622 Phaseolus vulgaris
Phvul.009G216800 1.0kb downstream 1.0kb downstream 17398 true Chr09: 32661225-32678622 Phaseolus vulgaris
Phvul.009G216800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32661225-32662224 Phaseolus vulgaris
Phvul.009G216800 2.0kb upstream 2.0kb upstream 18398 true Chr09: 32662225-32680622 Phaseolus vulgaris
Phvul.009G216800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32678623-32680622 Phaseolus vulgaris
Phvul.009G216800 2.0kb downstream 2.0kb downstream 18398 true Chr09: 32660225-32678622 Phaseolus vulgaris
Phvul.009G216800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32660225-32662224 Phaseolus vulgaris
Phvul.009G216800 5.0kb upstream 5.0kb upstream 21398 true Chr09: 32662225-32683622 Phaseolus vulgaris
Phvul.009G216800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32678623-32683622 Phaseolus vulgaris
Phvul.009G216800 5.0kb downstream 5.0kb downstream 21398 true Chr09: 32657225-32678622 Phaseolus vulgaris
Phvul.009G216800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32657225-32662224 Phaseolus vulgaris
Phvul.009G216800 10.0kb upstream 10.0kb upstream 26398 true Chr09: 32662225-32688622 Phaseolus vulgaris
Phvul.009G216800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32678623-32688622 Phaseolus vulgaris
Phvul.009G216800 10.0kb downstream 10.0kb downstream 26398 true Chr09: 32652225-32678622 Phaseolus vulgaris
Phvul.009G216800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32652225-32662224 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307906 5265 Fabidae View MSA
124066171 5270 Rosid View MSA
123736860 5271 Pentapetalae View MSA
122786911 5272 Eudicot View MSA
122042525 5273 Angiosperm View MSA
121347955 5274 Embryophyte View MSA
123428198 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.6035 0.0 14.9999   Low
cufflinks 10.3973 0.0 26.9745    
cufflinks 14.8002 0.0 38.2647    
cufflinks 11.3354 0.0 29.3865    
cufflinks 14.5703 0.0 37.6616    
cufflinks 15.1744 0.0 39.2369    
cufflinks 13.8627 0.0 35.8325    
cufflinks 11.9374 0.0 30.8768    
cufflinks 17.8271 0.0 46.178   High
cufflinks 13.2861 0.0 34.3443    
cufflinks 16.0032 0.0 41.3857    

0 Strain