Gene : Phvul.009G217600 P. vulgaris v2.1
Defline:  (1 of 1) K14558 - periodic tryptophan protein 2 (PWP2, UTP1) Genomic Order:  2229
Name:  ? Phvul.009G217600 Secondary Identifier:  ? PAC:37151161
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G217600 0.5kb upstream 0.5kb upstream 5712 true Chr09: 32911100-32916811 Phaseolus vulgaris
Phvul.009G217600 0.5kb upstream 0.5kb upstream 500 false Chr09: 32911100-32911599 Phaseolus vulgaris
Phvul.009G217600 0.5kb downstream 0.5kb downstream 5712 true Chr09: 32911600-32917311 Phaseolus vulgaris
Phvul.009G217600 0.5kb downstream 0.5kb downstream 500 false Chr09: 32916812-32917311 Phaseolus vulgaris
Phvul.009G217600 1.0kb upstream 1.0kb upstream 6212 true Chr09: 32910600-32916811 Phaseolus vulgaris
Phvul.009G217600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32910600-32911599 Phaseolus vulgaris
Phvul.009G217600 1.0kb downstream 1.0kb downstream 6212 true Chr09: 32911600-32917811 Phaseolus vulgaris
Phvul.009G217600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32916812-32917811 Phaseolus vulgaris
Phvul.009G217600 2.0kb upstream 2.0kb upstream 7212 true Chr09: 32909600-32916811 Phaseolus vulgaris
Phvul.009G217600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32909600-32911599 Phaseolus vulgaris
Phvul.009G217600 2.0kb downstream 2.0kb downstream 7212 true Chr09: 32911600-32918811 Phaseolus vulgaris
Phvul.009G217600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32916812-32918811 Phaseolus vulgaris
Phvul.009G217600 5.0kb upstream 5.0kb upstream 10212 true Chr09: 32906600-32916811 Phaseolus vulgaris
Phvul.009G217600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32906600-32911599 Phaseolus vulgaris
Phvul.009G217600 5.0kb downstream 5.0kb downstream 10212 true Chr09: 32911600-32921811 Phaseolus vulgaris
Phvul.009G217600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32916812-32921811 Phaseolus vulgaris
Phvul.009G217600 10.0kb upstream 10.0kb upstream 15212 true Chr09: 32901600-32916811 Phaseolus vulgaris
Phvul.009G217600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32901600-32911599 Phaseolus vulgaris
Phvul.009G217600 10.0kb downstream 10.0kb downstream 15212 true Chr09: 32911600-32926811 Phaseolus vulgaris
Phvul.009G217600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32916812-32926811 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301197 5265 Fabidae View MSA
124068186 5270 Rosid View MSA
123748655 5271 Pentapetalae View MSA
122789333 5272 Eudicot View MSA
122043279 5273 Angiosperm View MSA
121345886 5274 Embryophyte View MSA
123424187 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.94641 0.0 13.2961   Low
cufflinks 11.3096 0.0 29.2586    
cufflinks 5.22607 0.0 14.0326   Low
cufflinks 5.34286 0.0 14.3633   Low
cufflinks 9.82232 0.0 25.4739    
cufflinks 4.96605 0.0 13.3894   Low
cufflinks 10.2883 0.0 26.6531    
cufflinks 10.3309 0.0 26.7553    
cufflinks 12.891 0.0 33.3226   High
cufflinks 9.70749 0.0 25.1825    
cufflinks 8.37444 0.0 21.8445    

0 Strain