Gene : Phvul.009G218300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10694:SF41 - JUMONJI DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  2236
Name:  ? Phvul.009G218300 Secondary Identifier:  ? PAC:37150814
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G218300 0.5kb upstream 0.5kb upstream 7366 true Chr09: 33037615-33044980 Phaseolus vulgaris
Phvul.009G218300 0.5kb upstream 0.5kb upstream 500 false Chr09: 33037615-33038114 Phaseolus vulgaris
Phvul.009G218300 0.5kb downstream 0.5kb downstream 7366 true Chr09: 33038115-33045480 Phaseolus vulgaris
Phvul.009G218300 0.5kb downstream 0.5kb downstream 500 false Chr09: 33044981-33045480 Phaseolus vulgaris
Phvul.009G218300 1.0kb upstream 1.0kb upstream 7866 true Chr09: 33037115-33044980 Phaseolus vulgaris
Phvul.009G218300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 33037115-33038114 Phaseolus vulgaris
Phvul.009G218300 1.0kb downstream 1.0kb downstream 7866 true Chr09: 33038115-33045980 Phaseolus vulgaris
Phvul.009G218300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 33044981-33045980 Phaseolus vulgaris
Phvul.009G218300 2.0kb upstream 2.0kb upstream 8866 true Chr09: 33036115-33044980 Phaseolus vulgaris
Phvul.009G218300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 33036115-33038114 Phaseolus vulgaris
Phvul.009G218300 2.0kb downstream 2.0kb downstream 8866 true Chr09: 33038115-33046980 Phaseolus vulgaris
Phvul.009G218300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 33044981-33046980 Phaseolus vulgaris
Phvul.009G218300 5.0kb upstream 5.0kb upstream 11866 true Chr09: 33033115-33044980 Phaseolus vulgaris
Phvul.009G218300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 33033115-33038114 Phaseolus vulgaris
Phvul.009G218300 5.0kb downstream 5.0kb downstream 11866 true Chr09: 33038115-33049980 Phaseolus vulgaris
Phvul.009G218300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 33044981-33049980 Phaseolus vulgaris
Phvul.009G218300 10.0kb upstream 10.0kb upstream 16866 true Chr09: 33028115-33044980 Phaseolus vulgaris
Phvul.009G218300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 33028115-33038114 Phaseolus vulgaris
Phvul.009G218300 10.0kb downstream 10.0kb downstream 16866 true Chr09: 33038115-33054980 Phaseolus vulgaris
Phvul.009G218300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 33044981-33054980 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314311 5265 Fabidae View MSA
124068572 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.723339 0.0 2.36244   Low
cufflinks 1.43907 0.0 4.34933    
cufflinks 3.15567 0.0 8.75307    
cufflinks 0.881228 0.0 2.85021    
cufflinks 1.02609 0.0 3.25486    
cufflinks 2.45381 0.0 6.98246    
cufflinks 2.71094 0.0 7.65702    
cufflinks 10.447 0.0 27.0114   High
cufflinks 1.78027 0.0 5.2716    
cufflinks 2.09512 0.0 6.07259    
cufflinks 0.950597 0.0 3.03369    

0 Strain