Gene : Phvul.009G220500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31342:SF12 - F11A17.16 Genomic Order:  2256
Name:  ? Phvul.009G220500 Secondary Identifier:  ? PAC:37150267
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G220500 0.5kb upstream 0.5kb upstream 8514 true Chr09: 33302870-33311383 Phaseolus vulgaris
Phvul.009G220500 0.5kb upstream 0.5kb upstream 500 false Chr09: 33302870-33303369 Phaseolus vulgaris
Phvul.009G220500 0.5kb downstream 0.5kb downstream 8514 true Chr09: 33303370-33311883 Phaseolus vulgaris
Phvul.009G220500 0.5kb downstream 0.5kb downstream 500 false Chr09: 33311384-33311883 Phaseolus vulgaris
Phvul.009G220500 1.0kb upstream 1.0kb upstream 9014 true Chr09: 33302370-33311383 Phaseolus vulgaris
Phvul.009G220500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 33302370-33303369 Phaseolus vulgaris
Phvul.009G220500 1.0kb downstream 1.0kb downstream 9014 true Chr09: 33303370-33312383 Phaseolus vulgaris
Phvul.009G220500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 33311384-33312383 Phaseolus vulgaris
Phvul.009G220500 2.0kb upstream 2.0kb upstream 10014 true Chr09: 33301370-33311383 Phaseolus vulgaris
Phvul.009G220500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 33301370-33303369 Phaseolus vulgaris
Phvul.009G220500 2.0kb downstream 2.0kb downstream 10014 true Chr09: 33303370-33313383 Phaseolus vulgaris
Phvul.009G220500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 33311384-33313383 Phaseolus vulgaris
Phvul.009G220500 5.0kb upstream 5.0kb upstream 13014 true Chr09: 33298370-33311383 Phaseolus vulgaris
Phvul.009G220500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 33298370-33303369 Phaseolus vulgaris
Phvul.009G220500 5.0kb downstream 5.0kb downstream 13014 true Chr09: 33303370-33316383 Phaseolus vulgaris
Phvul.009G220500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 33311384-33316383 Phaseolus vulgaris
Phvul.009G220500 10.0kb upstream 10.0kb upstream 18014 true Chr09: 33293370-33311383 Phaseolus vulgaris
Phvul.009G220500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 33293370-33303369 Phaseolus vulgaris
Phvul.009G220500 10.0kb downstream 10.0kb downstream 18014 true Chr09: 33303370-33321383 Phaseolus vulgaris
Phvul.009G220500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 33311384-33321383 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310858 5265 Fabidae View MSA
124068159 5270 Rosid View MSA
123646677 5271 Pentapetalae View MSA
122790605 5272 Eudicot View MSA
122043379 5273 Angiosperm View MSA
121310114 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.800381 0.0 4.09684   Low
cufflinks 3.51471 0.0 14.1816    
cufflinks 2.06165 0.0 8.11121    
cufflinks 2.77425 0.0 10.4303    
cufflinks 7.68416 0.0 26.6689   High
cufflinks 1.86829 0.0 7.57951    
cufflinks 4.93249 0.0 16.8669    
cufflinks 3.14717 0.0 11.0491    
cufflinks 3.96518 0.0 14.125    
cufflinks 4.21716 0.0 16.4857    
cufflinks 10.7832 0.0 31.8265   High

0 Strain