Gene : Phvul.009G204100 P. vulgaris v2.1
Defline:  (1 of 2) K04773 - protease IV [EC:3.4.21.-] (sppA) Genomic Order:  2093
Name:  ? Phvul.009G204100 Secondary Identifier:  ? PAC:37150812
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G204100 0.5kb upstream 0.5kb upstream 14833 true Chr09: 30940998-30955830 Phaseolus vulgaris
Phvul.009G204100 0.5kb upstream 0.5kb upstream 500 false Chr09: 30940998-30941497 Phaseolus vulgaris
Phvul.009G204100 0.5kb downstream 0.5kb downstream 14833 true Chr09: 30941498-30956330 Phaseolus vulgaris
Phvul.009G204100 0.5kb downstream 0.5kb downstream 500 false Chr09: 30955831-30956330 Phaseolus vulgaris
Phvul.009G204100 1.0kb upstream 1.0kb upstream 15333 true Chr09: 30940498-30955830 Phaseolus vulgaris
Phvul.009G204100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 30940498-30941497 Phaseolus vulgaris
Phvul.009G204100 1.0kb downstream 1.0kb downstream 15333 true Chr09: 30941498-30956830 Phaseolus vulgaris
Phvul.009G204100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 30955831-30956830 Phaseolus vulgaris
Phvul.009G204100 2.0kb upstream 2.0kb upstream 16333 true Chr09: 30939498-30955830 Phaseolus vulgaris
Phvul.009G204100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 30939498-30941497 Phaseolus vulgaris
Phvul.009G204100 2.0kb downstream 2.0kb downstream 16333 true Chr09: 30941498-30957830 Phaseolus vulgaris
Phvul.009G204100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 30955831-30957830 Phaseolus vulgaris
Phvul.009G204100 5.0kb upstream 5.0kb upstream 19333 true Chr09: 30936498-30955830 Phaseolus vulgaris
Phvul.009G204100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 30936498-30941497 Phaseolus vulgaris
Phvul.009G204100 5.0kb downstream 5.0kb downstream 19333 true Chr09: 30941498-30960830 Phaseolus vulgaris
Phvul.009G204100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 30955831-30960830 Phaseolus vulgaris
Phvul.009G204100 10.0kb upstream 10.0kb upstream 24333 true Chr09: 30931498-30955830 Phaseolus vulgaris
Phvul.009G204100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 30931498-30941497 Phaseolus vulgaris
Phvul.009G204100 10.0kb downstream 10.0kb downstream 24333 true Chr09: 30941498-30965830 Phaseolus vulgaris
Phvul.009G204100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 30955831-30965830 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307269 5265 Fabidae View MSA
124067655 5270 Rosid View MSA
123738820 5271 Pentapetalae View MSA
122785684 5272 Eudicot View MSA
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.23791 0.0 14.3765    
cufflinks 6.68499 0.0 18.0049    
cufflinks 51.5373 0.0 141.123 High High
cufflinks 4.93017 0.0 13.7281    
cufflinks 4.91177 0.0 13.6585    
cufflinks 23.3646 0.0 60.653   High
cufflinks 2.24313 0.0 6.71455    
cufflinks 2.19069 0.0 6.54071    
cufflinks 1.59942 0.0 5.00176   Low
cufflinks 8.50537 0.0 22.5252    
cufflinks 5.15464 0.0 14.2512    

0 Strain