Gene : Phvul.009G204500 P. vulgaris v2.1
Defline:  (1 of 39) PF10250 - GDP-fucose protein O-fucosyltransferase (O-FucT) Genomic Order:  2097
Name:  ? Phvul.009G204500 Secondary Identifier:  ? PAC:37149613
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G204500 0.5kb upstream 0.5kb upstream 4529 true Chr09: 30996110-31000638 Phaseolus vulgaris
Phvul.009G204500 0.5kb upstream 0.5kb upstream 500 false Chr09: 31000139-31000638 Phaseolus vulgaris
Phvul.009G204500 0.5kb downstream 0.5kb downstream 4529 true Chr09: 30995610-31000138 Phaseolus vulgaris
Phvul.009G204500 0.5kb downstream 0.5kb downstream 500 false Chr09: 30995610-30996109 Phaseolus vulgaris
Phvul.009G204500 1.0kb upstream 1.0kb upstream 5029 true Chr09: 30996110-31001138 Phaseolus vulgaris
Phvul.009G204500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 31000139-31001138 Phaseolus vulgaris
Phvul.009G204500 1.0kb downstream 1.0kb downstream 5029 true Chr09: 30995110-31000138 Phaseolus vulgaris
Phvul.009G204500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 30995110-30996109 Phaseolus vulgaris
Phvul.009G204500 2.0kb upstream 2.0kb upstream 6029 true Chr09: 30996110-31002138 Phaseolus vulgaris
Phvul.009G204500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 31000139-31002138 Phaseolus vulgaris
Phvul.009G204500 2.0kb downstream 2.0kb downstream 6029 true Chr09: 30994110-31000138 Phaseolus vulgaris
Phvul.009G204500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 30994110-30996109 Phaseolus vulgaris
Phvul.009G204500 5.0kb upstream 5.0kb upstream 9029 true Chr09: 30996110-31005138 Phaseolus vulgaris
Phvul.009G204500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 31000139-31005138 Phaseolus vulgaris
Phvul.009G204500 5.0kb downstream 5.0kb downstream 9029 true Chr09: 30991110-31000138 Phaseolus vulgaris
Phvul.009G204500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 30991110-30996109 Phaseolus vulgaris
Phvul.009G204500 10.0kb upstream 10.0kb upstream 14029 true Chr09: 30996110-31010138 Phaseolus vulgaris
Phvul.009G204500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 31000139-31010138 Phaseolus vulgaris
Phvul.009G204500 10.0kb downstream 10.0kb downstream 14029 true Chr09: 30986110-31000138 Phaseolus vulgaris
Phvul.009G204500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 30986110-30996109 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310768 5265 Fabidae View MSA
124069771 5270 Rosid View MSA
123749174 5271 Pentapetalae View MSA
122786787 5272 Eudicot View MSA
122050382 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.03239 0.0 20.9616   Low
cufflinks 13.1494 0.0 33.9889    
cufflinks 15.9923 0.0 41.4053    
cufflinks 16.9808 0.0 43.9792    
cufflinks 19.5814 0.0 50.9403    
cufflinks 17.8833 0.0 46.4472    
cufflinks 13.2421 0.0 34.2358    
cufflinks 10.6847 0.0 27.6492   Low
cufflinks 12.8696 0.0 33.2657    
cufflinks 22.492 0.0 58.9097   High
cufflinks 18.0498 0.0 46.87    

0 Strain