Gene : Phvul.009G197100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31235:SF51 - PEROXIDASE 25 Genomic Order:  2023
Name:  ? Phvul.009G197100 Secondary Identifier:  ? PAC:37148694
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5466 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6824 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7214 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7445 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G197100 0.5kb upstream 0.5kb upstream 2658 true Chr09: 29947346-29950003 Phaseolus vulgaris
Phvul.009G197100 0.5kb upstream 0.5kb upstream 500 false Chr09: 29947346-29947845 Phaseolus vulgaris
Phvul.009G197100 0.5kb downstream 0.5kb downstream 2658 true Chr09: 29947846-29950503 Phaseolus vulgaris
Phvul.009G197100 0.5kb downstream 0.5kb downstream 500 false Chr09: 29950004-29950503 Phaseolus vulgaris
Phvul.009G197100 1.0kb upstream 1.0kb upstream 3158 true Chr09: 29946846-29950003 Phaseolus vulgaris
Phvul.009G197100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 29946846-29947845 Phaseolus vulgaris
Phvul.009G197100 1.0kb downstream 1.0kb downstream 3158 true Chr09: 29947846-29951003 Phaseolus vulgaris
Phvul.009G197100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 29950004-29951003 Phaseolus vulgaris
Phvul.009G197100 2.0kb upstream 2.0kb upstream 4158 true Chr09: 29945846-29950003 Phaseolus vulgaris
Phvul.009G197100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 29945846-29947845 Phaseolus vulgaris
Phvul.009G197100 2.0kb downstream 2.0kb downstream 4158 true Chr09: 29947846-29952003 Phaseolus vulgaris
Phvul.009G197100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 29950004-29952003 Phaseolus vulgaris
Phvul.009G197100 5.0kb upstream 5.0kb upstream 7158 true Chr09: 29942846-29950003 Phaseolus vulgaris
Phvul.009G197100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 29942846-29947845 Phaseolus vulgaris
Phvul.009G197100 5.0kb downstream 5.0kb downstream 7158 true Chr09: 29947846-29955003 Phaseolus vulgaris
Phvul.009G197100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 29950004-29955003 Phaseolus vulgaris
Phvul.009G197100 10.0kb upstream 10.0kb upstream 12158 true Chr09: 29937846-29950003 Phaseolus vulgaris
Phvul.009G197100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 29937846-29947845 Phaseolus vulgaris
Phvul.009G197100 10.0kb downstream 10.0kb downstream 12158 true Chr09: 29947846-29960003 Phaseolus vulgaris
Phvul.009G197100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 29950004-29960003 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305846 5265 Fabidae View MSA
124066864 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0278096 0.0 0.137824 Low  
cufflinks 0.0771095 0.0 0.343176 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.053396 0.0 0.248032 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0348889 0.0 0.168217 Low  
cufflinks 20.9548 0.0 55.0671   High
cufflinks 27.0394 0.0 70.2043   High
cufflinks 49.7038 0.0 128.864 High High
cufflinks 0.0290441 0.0 0.143363 Low  
cufflinks 0.115106 0.0 0.495383 Low  

0 Strain