Gene : Phvul.009G199000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31561:SF3 - 3-KETOACYL-COA SYNTHASE 11 Genomic Order:  2042
Name:  ? Phvul.009G199000 Secondary Identifier:  ? PAC:37149413
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5080 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6433 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6598 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7036 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7601 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7606 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7619 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G199000 0.5kb upstream 0.5kb upstream 3377 true Chr09: 30198232-30201608 Phaseolus vulgaris
Phvul.009G199000 0.5kb upstream 0.5kb upstream 500 false Chr09: 30198232-30198731 Phaseolus vulgaris
Phvul.009G199000 0.5kb downstream 0.5kb downstream 3377 true Chr09: 30198732-30202108 Phaseolus vulgaris
Phvul.009G199000 0.5kb downstream 0.5kb downstream 500 false Chr09: 30201609-30202108 Phaseolus vulgaris
Phvul.009G199000 1.0kb upstream 1.0kb upstream 3877 true Chr09: 30197732-30201608 Phaseolus vulgaris
Phvul.009G199000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 30197732-30198731 Phaseolus vulgaris
Phvul.009G199000 1.0kb downstream 1.0kb downstream 3877 true Chr09: 30198732-30202608 Phaseolus vulgaris
Phvul.009G199000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 30201609-30202608 Phaseolus vulgaris
Phvul.009G199000 2.0kb upstream 2.0kb upstream 4877 true Chr09: 30196732-30201608 Phaseolus vulgaris
Phvul.009G199000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 30196732-30198731 Phaseolus vulgaris
Phvul.009G199000 2.0kb downstream 2.0kb downstream 4877 true Chr09: 30198732-30203608 Phaseolus vulgaris
Phvul.009G199000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 30201609-30203608 Phaseolus vulgaris
Phvul.009G199000 5.0kb upstream 5.0kb upstream 7877 true Chr09: 30193732-30201608 Phaseolus vulgaris
Phvul.009G199000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 30193732-30198731 Phaseolus vulgaris
Phvul.009G199000 5.0kb downstream 5.0kb downstream 7877 true Chr09: 30198732-30206608 Phaseolus vulgaris
Phvul.009G199000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 30201609-30206608 Phaseolus vulgaris
Phvul.009G199000 10.0kb upstream 10.0kb upstream 12877 true Chr09: 30188732-30201608 Phaseolus vulgaris
Phvul.009G199000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 30188732-30198731 Phaseolus vulgaris
Phvul.009G199000 10.0kb downstream 10.0kb downstream 12877 true Chr09: 30198732-30211608 Phaseolus vulgaris
Phvul.009G199000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 30201609-30211608 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310983 5265 Fabidae View MSA
124069691 5270 Rosid View MSA
123752157 5271 Pentapetalae View MSA
122789250 5272 Eudicot View MSA
122044783 5273 Angiosperm View MSA
121349296 5274 Embryophyte View MSA
123425974 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.97102 0.0 26.5369    
cufflinks 9.14032 0.0 24.478    
cufflinks 11.9809 0.0 31.4406    
cufflinks 12.2971 0.0 32.3351    
cufflinks 5.19866 0.0 14.6312   Low
cufflinks 13.9123 0.0 36.3072   High
cufflinks 12.1242 0.0 31.8275    
cufflinks 9.32159 0.0 24.8804    
cufflinks 10.0486 0.0 26.7462    
cufflinks 14.4075 0.0 37.542   High
cufflinks 5.44709 0.0 15.2824   Low

0 Strain