Gene : Phvul.009G198700 P. vulgaris v2.1
Defline:  (1 of 5) 3.1.1.5 - Lysophospholipase / Phospholipase B Genomic Order:  2039
Name:  ? Phvul.009G198700 Secondary Identifier:  ? PAC:37150910
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7409 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G198700 0.5kb upstream 0.5kb upstream 9683 true Chr09: 30151437-30161119 Phaseolus vulgaris
Phvul.009G198700 0.5kb upstream 0.5kb upstream 500 false Chr09: 30160620-30161119 Phaseolus vulgaris
Phvul.009G198700 0.5kb downstream 0.5kb downstream 9683 true Chr09: 30150937-30160619 Phaseolus vulgaris
Phvul.009G198700 0.5kb downstream 0.5kb downstream 500 false Chr09: 30150937-30151436 Phaseolus vulgaris
Phvul.009G198700 1.0kb upstream 1.0kb upstream 10183 true Chr09: 30151437-30161619 Phaseolus vulgaris
Phvul.009G198700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 30160620-30161619 Phaseolus vulgaris
Phvul.009G198700 1.0kb downstream 1.0kb downstream 10183 true Chr09: 30150437-30160619 Phaseolus vulgaris
Phvul.009G198700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 30150437-30151436 Phaseolus vulgaris
Phvul.009G198700 2.0kb upstream 2.0kb upstream 11183 true Chr09: 30151437-30162619 Phaseolus vulgaris
Phvul.009G198700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 30160620-30162619 Phaseolus vulgaris
Phvul.009G198700 2.0kb downstream 2.0kb downstream 11183 true Chr09: 30149437-30160619 Phaseolus vulgaris
Phvul.009G198700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 30149437-30151436 Phaseolus vulgaris
Phvul.009G198700 5.0kb upstream 5.0kb upstream 14183 true Chr09: 30151437-30165619 Phaseolus vulgaris
Phvul.009G198700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 30160620-30165619 Phaseolus vulgaris
Phvul.009G198700 5.0kb downstream 5.0kb downstream 14183 true Chr09: 30146437-30160619 Phaseolus vulgaris
Phvul.009G198700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 30146437-30151436 Phaseolus vulgaris
Phvul.009G198700 10.0kb upstream 10.0kb upstream 19183 true Chr09: 30151437-30170619 Phaseolus vulgaris
Phvul.009G198700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 30160620-30170619 Phaseolus vulgaris
Phvul.009G198700 10.0kb downstream 10.0kb downstream 19183 true Chr09: 30141437-30160619 Phaseolus vulgaris
Phvul.009G198700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 30141437-30151436 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306434 5265 Fabidae View MSA
124070848 5270 Rosid View MSA
123747021 5271 Pentapetalae View MSA
122795492 5272 Eudicot View MSA
122046747 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9944 0.0 55.2842    
cufflinks 33.9097 0.0 87.7591 High  
cufflinks 56.8644 0.0 147.931 High High
cufflinks 42.8909 0.0 110.866 High High
cufflinks 24.4089 0.0 63.9308    
cufflinks 32.3734 0.0 83.8425    
cufflinks 16.8223 0.0 45.0338   Low
cufflinks 24.6674 0.0 64.3573    
cufflinks 25.0287 0.0 65.4938    
cufflinks 18.2993 0.0 48.6433   Low
cufflinks 25.0863 0.0 65.5907    

0 Strain