Gene : Phvul.009G200500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13677:SF0 - PROTEIN F53H1.3, ISOFORM A Genomic Order:  2057
Name:  ? Phvul.009G200500 Secondary Identifier:  ? PAC:37151885
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G200500 0.5kb upstream 0.5kb upstream 11194 true Chr09: 30459643-30470836 Phaseolus vulgaris
Phvul.009G200500 0.5kb upstream 0.5kb upstream 500 false Chr09: 30470337-30470836 Phaseolus vulgaris
Phvul.009G200500 0.5kb downstream 0.5kb downstream 11194 true Chr09: 30459143-30470336 Phaseolus vulgaris
Phvul.009G200500 0.5kb downstream 0.5kb downstream 500 false Chr09: 30459143-30459642 Phaseolus vulgaris
Phvul.009G200500 1.0kb upstream 1.0kb upstream 11694 true Chr09: 30459643-30471336 Phaseolus vulgaris
Phvul.009G200500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 30470337-30471336 Phaseolus vulgaris
Phvul.009G200500 1.0kb downstream 1.0kb downstream 11694 true Chr09: 30458643-30470336 Phaseolus vulgaris
Phvul.009G200500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 30458643-30459642 Phaseolus vulgaris
Phvul.009G200500 2.0kb upstream 2.0kb upstream 12694 true Chr09: 30459643-30472336 Phaseolus vulgaris
Phvul.009G200500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 30470337-30472336 Phaseolus vulgaris
Phvul.009G200500 2.0kb downstream 2.0kb downstream 12694 true Chr09: 30457643-30470336 Phaseolus vulgaris
Phvul.009G200500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 30457643-30459642 Phaseolus vulgaris
Phvul.009G200500 5.0kb upstream 5.0kb upstream 15694 true Chr09: 30459643-30475336 Phaseolus vulgaris
Phvul.009G200500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 30470337-30475336 Phaseolus vulgaris
Phvul.009G200500 5.0kb downstream 5.0kb downstream 15694 true Chr09: 30454643-30470336 Phaseolus vulgaris
Phvul.009G200500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 30454643-30459642 Phaseolus vulgaris
Phvul.009G200500 10.0kb upstream 10.0kb upstream 20694 true Chr09: 30459643-30480336 Phaseolus vulgaris
Phvul.009G200500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 30470337-30480336 Phaseolus vulgaris
Phvul.009G200500 10.0kb downstream 10.0kb downstream 20694 true Chr09: 30449643-30470336 Phaseolus vulgaris
Phvul.009G200500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 30449643-30459642 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310377 5265 Fabidae View MSA
124067041 5270 Rosid View MSA
123739049 5271 Pentapetalae View MSA
122789935 5272 Eudicot View MSA
122046522 5273 Angiosperm View MSA
121346566 5274 Embryophyte View MSA
123427841 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.93604 0.0 10.9543   Low
cufflinks 4.35982 0.0 17.1752    
cufflinks 5.50325 0.0 20.455   High
cufflinks 4.67321 0.0 15.5812    
cufflinks 5.0027 0.0 19.2998    
cufflinks 5.86366 0.0 21.7777   High
cufflinks 3.65287 0.0 15.6108    
cufflinks 3.51822 0.0 12.4488   Low
cufflinks 4.82986 0.0 18.8556    
cufflinks 4.04364 0.0 16.4254    
cufflinks 4.57557 0.0 18.0779    

0 Strain