Gene : Phvul.009G186800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22835//PTHR22835:SF267 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1909
Name:  ? Phvul.009G186800 Secondary Identifier:  ? PAC:37150551
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LIPAS-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G186800 0.5kb upstream 0.5kb upstream 2949 true Chr09: 28294082-28297030 Phaseolus vulgaris
Phvul.009G186800 0.5kb upstream 0.5kb upstream 500 false Chr09: 28296531-28297030 Phaseolus vulgaris
Phvul.009G186800 0.5kb downstream 0.5kb downstream 2949 true Chr09: 28293582-28296530 Phaseolus vulgaris
Phvul.009G186800 0.5kb downstream 0.5kb downstream 500 false Chr09: 28293582-28294081 Phaseolus vulgaris
Phvul.009G186800 1.0kb upstream 1.0kb upstream 3449 true Chr09: 28294082-28297530 Phaseolus vulgaris
Phvul.009G186800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28296531-28297530 Phaseolus vulgaris
Phvul.009G186800 1.0kb downstream 1.0kb downstream 3449 true Chr09: 28293082-28296530 Phaseolus vulgaris
Phvul.009G186800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28293082-28294081 Phaseolus vulgaris
Phvul.009G186800 2.0kb upstream 2.0kb upstream 4449 true Chr09: 28294082-28298530 Phaseolus vulgaris
Phvul.009G186800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28296531-28298530 Phaseolus vulgaris
Phvul.009G186800 2.0kb downstream 2.0kb downstream 4449 true Chr09: 28292082-28296530 Phaseolus vulgaris
Phvul.009G186800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28292082-28294081 Phaseolus vulgaris
Phvul.009G186800 5.0kb upstream 5.0kb upstream 7449 true Chr09: 28294082-28301530 Phaseolus vulgaris
Phvul.009G186800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28296531-28301530 Phaseolus vulgaris
Phvul.009G186800 5.0kb downstream 5.0kb downstream 7449 true Chr09: 28289082-28296530 Phaseolus vulgaris
Phvul.009G186800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28289082-28294081 Phaseolus vulgaris
Phvul.009G186800 10.0kb upstream 10.0kb upstream 12449 true Chr09: 28294082-28306530 Phaseolus vulgaris
Phvul.009G186800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28296531-28306530 Phaseolus vulgaris
Phvul.009G186800 10.0kb downstream 10.0kb downstream 12449 true Chr09: 28284082-28296530 Phaseolus vulgaris
Phvul.009G186800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28284082-28294081 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300197 5265 Fabidae View MSA
124065806 5270 Rosid View MSA
123747165 5271 Pentapetalae View MSA
122791413 5272 Eudicot View MSA
122042370 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.155157 0.0 0.653763 Low  
cufflinks 0.643402 0.0 2.4207    
cufflinks 0.053702 0.0 0.250826 Low  
cufflinks 0.0633153 0.0 0.294108 Low  
cufflinks 0.450046 0.0 1.75367 Low  
cufflinks 0.0800271 0.0 0.35916 Low  
cufflinks 9.97732 0.0 28.1154   High
cufflinks 5.16008 0.0 15.5142   High
cufflinks 4.64646 0.0 14.2773   High
cufflinks 0.0166371 0.0 0.0889901 Low Low
cufflinks 0.198867 0.0 0.825554 Low  

0 Strain