Gene : Phvul.009G186600 P. vulgaris v2.1
Defline:  (1 of 7) PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Genomic Order:  1907
Name:  ? Phvul.009G186600 Secondary Identifier:  ? PAC:37151799
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G186600 0.5kb upstream 0.5kb upstream 3708 true Chr09: 28251672-28255379 Phaseolus vulgaris
Phvul.009G186600 0.5kb upstream 0.5kb upstream 500 false Chr09: 28254880-28255379 Phaseolus vulgaris
Phvul.009G186600 0.5kb downstream 0.5kb downstream 3708 true Chr09: 28251172-28254879 Phaseolus vulgaris
Phvul.009G186600 0.5kb downstream 0.5kb downstream 500 false Chr09: 28251172-28251671 Phaseolus vulgaris
Phvul.009G186600 1.0kb upstream 1.0kb upstream 4208 true Chr09: 28251672-28255879 Phaseolus vulgaris
Phvul.009G186600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28254880-28255879 Phaseolus vulgaris
Phvul.009G186600 1.0kb downstream 1.0kb downstream 4208 true Chr09: 28250672-28254879 Phaseolus vulgaris
Phvul.009G186600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28250672-28251671 Phaseolus vulgaris
Phvul.009G186600 2.0kb upstream 2.0kb upstream 5208 true Chr09: 28251672-28256879 Phaseolus vulgaris
Phvul.009G186600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28254880-28256879 Phaseolus vulgaris
Phvul.009G186600 2.0kb downstream 2.0kb downstream 5208 true Chr09: 28249672-28254879 Phaseolus vulgaris
Phvul.009G186600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28249672-28251671 Phaseolus vulgaris
Phvul.009G186600 5.0kb upstream 5.0kb upstream 8208 true Chr09: 28251672-28259879 Phaseolus vulgaris
Phvul.009G186600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28254880-28259879 Phaseolus vulgaris
Phvul.009G186600 5.0kb downstream 5.0kb downstream 8208 true Chr09: 28246672-28254879 Phaseolus vulgaris
Phvul.009G186600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28246672-28251671 Phaseolus vulgaris
Phvul.009G186600 10.0kb upstream 10.0kb upstream 13208 true Chr09: 28251672-28264879 Phaseolus vulgaris
Phvul.009G186600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28254880-28264879 Phaseolus vulgaris
Phvul.009G186600 10.0kb downstream 10.0kb downstream 13208 true Chr09: 28241672-28254879 Phaseolus vulgaris
Phvul.009G186600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28241672-28251671 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311132 5265 Fabidae View MSA
124066324 5270 Rosid View MSA
123751425 5271 Pentapetalae View MSA
122791287 5272 Eudicot View MSA
122048139 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7771 0.0 28.3388    
cufflinks 7.25631 0.0 19.6602    
cufflinks 15.4791 0.0 40.1455   High
cufflinks 4.1852 0.0 11.856   Low
cufflinks 7.26144 0.0 19.7038    
cufflinks 6.84629 0.0 18.6477    
cufflinks 10.8089 0.0 28.3292    
cufflinks 4.81935 0.0 13.4876   Low
cufflinks 10.427 0.0 27.3591    
cufflinks 8.80428 0.0 23.5407    
cufflinks 6.18353 0.0 16.9751    

0 Strain