Gene : Phvul.009G185700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31889:SF2 - FUCOSYLTRANSFERASE 2-RELATED Genomic Order:  1897
Name:  ? Phvul.009G185700 Secondary Identifier:  ? PAC:37149224
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G185700 0.5kb upstream 0.5kb upstream 3452 true Chr09: 28051929-28055380 Phaseolus vulgaris
Phvul.009G185700 0.5kb upstream 0.5kb upstream 500 false Chr09: 28051929-28052428 Phaseolus vulgaris
Phvul.009G185700 0.5kb downstream 0.5kb downstream 3452 true Chr09: 28052429-28055880 Phaseolus vulgaris
Phvul.009G185700 0.5kb downstream 0.5kb downstream 500 false Chr09: 28055381-28055880 Phaseolus vulgaris
Phvul.009G185700 1.0kb upstream 1.0kb upstream 3952 true Chr09: 28051429-28055380 Phaseolus vulgaris
Phvul.009G185700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28051429-28052428 Phaseolus vulgaris
Phvul.009G185700 1.0kb downstream 1.0kb downstream 3952 true Chr09: 28052429-28056380 Phaseolus vulgaris
Phvul.009G185700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28055381-28056380 Phaseolus vulgaris
Phvul.009G185700 2.0kb upstream 2.0kb upstream 4952 true Chr09: 28050429-28055380 Phaseolus vulgaris
Phvul.009G185700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28050429-28052428 Phaseolus vulgaris
Phvul.009G185700 2.0kb downstream 2.0kb downstream 4952 true Chr09: 28052429-28057380 Phaseolus vulgaris
Phvul.009G185700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28055381-28057380 Phaseolus vulgaris
Phvul.009G185700 5.0kb upstream 5.0kb upstream 7952 true Chr09: 28047429-28055380 Phaseolus vulgaris
Phvul.009G185700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28047429-28052428 Phaseolus vulgaris
Phvul.009G185700 5.0kb downstream 5.0kb downstream 7952 true Chr09: 28052429-28060380 Phaseolus vulgaris
Phvul.009G185700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28055381-28060380 Phaseolus vulgaris
Phvul.009G185700 10.0kb upstream 10.0kb upstream 12952 true Chr09: 28042429-28055380 Phaseolus vulgaris
Phvul.009G185700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28042429-28052428 Phaseolus vulgaris
Phvul.009G185700 10.0kb downstream 10.0kb downstream 12952 true Chr09: 28052429-28065380 Phaseolus vulgaris
Phvul.009G185700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28055381-28065380 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296437 5265 Fabidae View MSA
124069231 5270 Rosid View MSA
123743529 5271 Pentapetalae View MSA
122787237 5272 Eudicot View MSA
122051157 5273 Angiosperm View MSA
121351526 5274 Embryophyte View MSA
123427849 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58644 0.0 5.14726   Low
cufflinks 4.46521 0.0 12.8911    
cufflinks 2.12036 0.0 6.64444   Low
cufflinks 4.66895 0.0 13.4598    
cufflinks 3.83136 0.0 11.2941    
cufflinks 4.48766 0.0 12.9402    
cufflinks 2.69301 0.0 8.23445    
cufflinks 2.59828 0.0 7.9435    
cufflinks 3.58166 0.0 10.6205    
cufflinks 4.8538 0.0 13.9056    
cufflinks 5.21716 0.0 14.8889   High

0 Strain