Gene : Phvul.009G189700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31429:SF1 - WRKY FAMILY TRANSCRIPTION FACTOR-RELATED Genomic Order:  1942
Name:  ? Phvul.009G189700 Secondary Identifier:  ? PAC:37148996
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G189700 0.5kb upstream 0.5kb upstream 4155 true Chr09: 28795468-28799622 Phaseolus vulgaris
Phvul.009G189700 0.5kb upstream 0.5kb upstream 500 false Chr09: 28799123-28799622 Phaseolus vulgaris
Phvul.009G189700 0.5kb downstream 0.5kb downstream 4155 true Chr09: 28794968-28799122 Phaseolus vulgaris
Phvul.009G189700 0.5kb downstream 0.5kb downstream 500 false Chr09: 28794968-28795467 Phaseolus vulgaris
Phvul.009G189700 1.0kb upstream 1.0kb upstream 4655 true Chr09: 28795468-28800122 Phaseolus vulgaris
Phvul.009G189700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28799123-28800122 Phaseolus vulgaris
Phvul.009G189700 1.0kb downstream 1.0kb downstream 4655 true Chr09: 28794468-28799122 Phaseolus vulgaris
Phvul.009G189700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28794468-28795467 Phaseolus vulgaris
Phvul.009G189700 2.0kb upstream 2.0kb upstream 5655 true Chr09: 28795468-28801122 Phaseolus vulgaris
Phvul.009G189700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28799123-28801122 Phaseolus vulgaris
Phvul.009G189700 2.0kb downstream 2.0kb downstream 5655 true Chr09: 28793468-28799122 Phaseolus vulgaris
Phvul.009G189700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28793468-28795467 Phaseolus vulgaris
Phvul.009G189700 5.0kb upstream 5.0kb upstream 8655 true Chr09: 28795468-28804122 Phaseolus vulgaris
Phvul.009G189700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28799123-28804122 Phaseolus vulgaris
Phvul.009G189700 5.0kb downstream 5.0kb downstream 8655 true Chr09: 28790468-28799122 Phaseolus vulgaris
Phvul.009G189700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28790468-28795467 Phaseolus vulgaris
Phvul.009G189700 10.0kb upstream 10.0kb upstream 13655 true Chr09: 28795468-28809122 Phaseolus vulgaris
Phvul.009G189700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28799123-28809122 Phaseolus vulgaris
Phvul.009G189700 10.0kb downstream 10.0kb downstream 13655 true Chr09: 28785468-28799122 Phaseolus vulgaris
Phvul.009G189700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28785468-28795467 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311406 5265 Fabidae View MSA
124070003 5270 Rosid View MSA
123745248 5271 Pentapetalae View MSA
122796714 5272 Eudicot View MSA
122044193 5273 Angiosperm View MSA
121350483 5274 Embryophyte View MSA
123381752 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.02946 0.0 0.136846 Low Low
cufflinks 0.112445 0.0 0.462773 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.18133 0.0 14.486    
cufflinks 1.91389 0.0 5.95221    
cufflinks 9.09179 0.0 24.2198    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain