Gene : Phvul.009G188150 P. vulgaris v2.1
Genomic Order:  1923 Name:  ? Phvul.009G188150
Secondary Identifier:  ? PAC:37151528
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G188150 0.5kb upstream 0.5kb upstream 9708 true Chr09: 28556122-28565829 Phaseolus vulgaris
Phvul.009G188150 0.5kb upstream 0.5kb upstream 500 false Chr09: 28556122-28556621 Phaseolus vulgaris
Phvul.009G188150 0.5kb downstream 0.5kb downstream 9708 true Chr09: 28556622-28566329 Phaseolus vulgaris
Phvul.009G188150 0.5kb downstream 0.5kb downstream 500 false Chr09: 28565830-28566329 Phaseolus vulgaris
Phvul.009G188150 1.0kb upstream 1.0kb upstream 10208 true Chr09: 28555622-28565829 Phaseolus vulgaris
Phvul.009G188150 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28555622-28556621 Phaseolus vulgaris
Phvul.009G188150 1.0kb downstream 1.0kb downstream 10208 true Chr09: 28556622-28566829 Phaseolus vulgaris
Phvul.009G188150 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28565830-28566829 Phaseolus vulgaris
Phvul.009G188150 2.0kb upstream 2.0kb upstream 11208 true Chr09: 28554622-28565829 Phaseolus vulgaris
Phvul.009G188150 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28554622-28556621 Phaseolus vulgaris
Phvul.009G188150 2.0kb downstream 2.0kb downstream 11208 true Chr09: 28556622-28567829 Phaseolus vulgaris
Phvul.009G188150 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28565830-28567829 Phaseolus vulgaris
Phvul.009G188150 5.0kb upstream 5.0kb upstream 14208 true Chr09: 28551622-28565829 Phaseolus vulgaris
Phvul.009G188150 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28551622-28556621 Phaseolus vulgaris
Phvul.009G188150 5.0kb downstream 5.0kb downstream 14208 true Chr09: 28556622-28570829 Phaseolus vulgaris
Phvul.009G188150 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28565830-28570829 Phaseolus vulgaris
Phvul.009G188150 10.0kb upstream 10.0kb upstream 19208 true Chr09: 28546622-28565829 Phaseolus vulgaris
Phvul.009G188150 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28546622-28556621 Phaseolus vulgaris
Phvul.009G188150 10.0kb downstream 10.0kb downstream 19208 true Chr09: 28556622-28575829 Phaseolus vulgaris
Phvul.009G188150 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28565830-28575829 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306157 5265 Fabidae View MSA
124066550 5270 Rosid View MSA
123744348 5271 Pentapetalae View MSA
122792295 5272 Eudicot View MSA
122042514 5273 Angiosperm View MSA
121347844 5274 Embryophyte View MSA
123425000 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.00265 0.0 21.3431    
cufflinks 6.81175 0.0 27.4064    
cufflinks 6.62456 0.0 20.0312    
cufflinks 7.79144 0.0 29.2192   High
cufflinks 5.72449 0.0 18.0687    
cufflinks 7.88853 0.0 27.5247   High
cufflinks 3.95943 0.0 17.7934   Low
cufflinks 4.76879 0.0 21.4414    
cufflinks 4.73645 0.0 21.3597    
cufflinks 5.53867 0.0 24.238    
cufflinks 5.43121 0.0 17.4158    

0 Strain