Gene : Phvul.009G189300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA // SUBFAMILY NOT NAMED Genomic Order:  1938
Name:  ? Phvul.009G189300 Secondary Identifier:  ? PAC:37148588
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G189300 0.5kb upstream 0.5kb upstream 8769 true Chr09: 28730904-28739672 Phaseolus vulgaris
Phvul.009G189300 0.5kb upstream 0.5kb upstream 500 false Chr09: 28739173-28739672 Phaseolus vulgaris
Phvul.009G189300 0.5kb downstream 0.5kb downstream 8769 true Chr09: 28730404-28739172 Phaseolus vulgaris
Phvul.009G189300 0.5kb downstream 0.5kb downstream 500 false Chr09: 28730404-28730903 Phaseolus vulgaris
Phvul.009G189300 1.0kb upstream 1.0kb upstream 9269 true Chr09: 28730904-28740172 Phaseolus vulgaris
Phvul.009G189300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28739173-28740172 Phaseolus vulgaris
Phvul.009G189300 1.0kb downstream 1.0kb downstream 9269 true Chr09: 28729904-28739172 Phaseolus vulgaris
Phvul.009G189300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28729904-28730903 Phaseolus vulgaris
Phvul.009G189300 2.0kb upstream 2.0kb upstream 10269 true Chr09: 28730904-28741172 Phaseolus vulgaris
Phvul.009G189300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28739173-28741172 Phaseolus vulgaris
Phvul.009G189300 2.0kb downstream 2.0kb downstream 10269 true Chr09: 28728904-28739172 Phaseolus vulgaris
Phvul.009G189300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28728904-28730903 Phaseolus vulgaris
Phvul.009G189300 5.0kb upstream 5.0kb upstream 13269 true Chr09: 28730904-28744172 Phaseolus vulgaris
Phvul.009G189300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28739173-28744172 Phaseolus vulgaris
Phvul.009G189300 5.0kb downstream 5.0kb downstream 13269 true Chr09: 28725904-28739172 Phaseolus vulgaris
Phvul.009G189300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28725904-28730903 Phaseolus vulgaris
Phvul.009G189300 10.0kb upstream 10.0kb upstream 18269 true Chr09: 28730904-28749172 Phaseolus vulgaris
Phvul.009G189300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28739173-28749172 Phaseolus vulgaris
Phvul.009G189300 10.0kb downstream 10.0kb downstream 18269 true Chr09: 28720904-28739172 Phaseolus vulgaris
Phvul.009G189300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28720904-28730903 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041021 5273 Angiosperm View MSA
122309989 5265 Fabidae View MSA
124064975 5270 Rosid View MSA
123738851 5271 Pentapetalae View MSA
122789582 5272 Eudicot View MSA
123429075 5275 Viridiplantae View MSA
121349830 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.1296 0.0 3.53804    
cufflinks 1.44097 0.0 4.39381    
cufflinks 0.175011 0.0 0.662345 Low Low
cufflinks 0.297245 0.0 1.08502 Low  
cufflinks 0.195772 0.0 0.73875 Low Low
cufflinks 0.286922 0.0 1.04244 Low  
cufflinks 7.35456 0.0 19.2829   High
cufflinks 30.4998 0.0 81.9576 High High
cufflinks 2.23495 0.0 6.49537    
cufflinks 2.73339 0.0 7.76674    
cufflinks 0.571161 0.0 1.94432    

0 Strain