Gene : Phvul.009G190830 P. vulgaris v2.1
Defline:  (1 of 3) K18211 - synaptosomal-associated protein 25 (SNAP25) Genomic Order:  1960
Name:  ? Phvul.009G190830 Secondary Identifier:  ? PAC:37150155
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G190830 0.5kb upstream 0.5kb upstream 3066 true Chr09: 29065829-29068894 Phaseolus vulgaris
Phvul.009G190830 0.5kb upstream 0.5kb upstream 500 false Chr09: 29068395-29068894 Phaseolus vulgaris
Phvul.009G190830 0.5kb downstream 0.5kb downstream 3066 true Chr09: 29065329-29068394 Phaseolus vulgaris
Phvul.009G190830 0.5kb downstream 0.5kb downstream 500 false Chr09: 29065329-29065828 Phaseolus vulgaris
Phvul.009G190830 1.0kb upstream 1.0kb upstream 3566 true Chr09: 29065829-29069394 Phaseolus vulgaris
Phvul.009G190830 1.0kb upstream 1.0kb upstream 1000 false Chr09: 29068395-29069394 Phaseolus vulgaris
Phvul.009G190830 1.0kb downstream 1.0kb downstream 3566 true Chr09: 29064829-29068394 Phaseolus vulgaris
Phvul.009G190830 1.0kb downstream 1.0kb downstream 1000 false Chr09: 29064829-29065828 Phaseolus vulgaris
Phvul.009G190830 2.0kb upstream 2.0kb upstream 4566 true Chr09: 29065829-29070394 Phaseolus vulgaris
Phvul.009G190830 2.0kb upstream 2.0kb upstream 2000 false Chr09: 29068395-29070394 Phaseolus vulgaris
Phvul.009G190830 2.0kb downstream 2.0kb downstream 4566 true Chr09: 29063829-29068394 Phaseolus vulgaris
Phvul.009G190830 2.0kb downstream 2.0kb downstream 2000 false Chr09: 29063829-29065828 Phaseolus vulgaris
Phvul.009G190830 5.0kb upstream 5.0kb upstream 7566 true Chr09: 29065829-29073394 Phaseolus vulgaris
Phvul.009G190830 5.0kb upstream 5.0kb upstream 5000 false Chr09: 29068395-29073394 Phaseolus vulgaris
Phvul.009G190830 5.0kb downstream 5.0kb downstream 7566 true Chr09: 29060829-29068394 Phaseolus vulgaris
Phvul.009G190830 5.0kb downstream 5.0kb downstream 5000 false Chr09: 29060829-29065828 Phaseolus vulgaris
Phvul.009G190830 10.0kb upstream 10.0kb upstream 12566 true Chr09: 29065829-29078394 Phaseolus vulgaris
Phvul.009G190830 10.0kb upstream 10.0kb upstream 10000 false Chr09: 29068395-29078394 Phaseolus vulgaris
Phvul.009G190830 10.0kb downstream 10.0kb downstream 12566 true Chr09: 29055829-29068394 Phaseolus vulgaris
Phvul.009G190830 10.0kb downstream 10.0kb downstream 10000 false Chr09: 29055829-29065828 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297446 5265 Fabidae View MSA
124069233 5270 Rosid View MSA
123745951 5271 Pentapetalae View MSA
122796965 5272 Eudicot View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.6144 0.0 72.4741    
cufflinks 6.20521 0.0 21.3019    
cufflinks 5.88837 0.0 20.4578   Low
cufflinks 10.3881 0.0 33.5877    
cufflinks 7.97326 0.0 30.8313    
cufflinks 4.54084 0.0 17.0974   Low
cufflinks 36.4534 0.0 115.882 High High
cufflinks 23.5133 0.0 87.2669    
cufflinks 35.5801 0.0 113.296 High High
cufflinks 12.4872 0.0 51.1013    
cufflinks 11.0159 0.0 39.4853    

0 Strain