Gene : Phvul.009G190797 P. vulgaris v2.1
Defline:  (1 of 2) PTHR14363:SF17 - HEPARANASE-LIKE PROTEIN 1-RELATED Genomic Order:  1959
Name:  ? Phvul.009G190797 Secondary Identifier:  ? PAC:37151710
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7213 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7214 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7445 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G190797 0.5kb upstream 0.5kb upstream 15305 true Chr09: 29046434-29061738 Phaseolus vulgaris
Phvul.009G190797 0.5kb upstream 0.5kb upstream 500 false Chr09: 29046434-29046933 Phaseolus vulgaris
Phvul.009G190797 0.5kb downstream 0.5kb downstream 15305 true Chr09: 29046934-29062238 Phaseolus vulgaris
Phvul.009G190797 0.5kb downstream 0.5kb downstream 500 false Chr09: 29061739-29062238 Phaseolus vulgaris
Phvul.009G190797 1.0kb upstream 1.0kb upstream 15805 true Chr09: 29045934-29061738 Phaseolus vulgaris
Phvul.009G190797 1.0kb upstream 1.0kb upstream 1000 false Chr09: 29045934-29046933 Phaseolus vulgaris
Phvul.009G190797 1.0kb downstream 1.0kb downstream 15805 true Chr09: 29046934-29062738 Phaseolus vulgaris
Phvul.009G190797 1.0kb downstream 1.0kb downstream 1000 false Chr09: 29061739-29062738 Phaseolus vulgaris
Phvul.009G190797 2.0kb upstream 2.0kb upstream 16805 true Chr09: 29044934-29061738 Phaseolus vulgaris
Phvul.009G190797 2.0kb upstream 2.0kb upstream 2000 false Chr09: 29044934-29046933 Phaseolus vulgaris
Phvul.009G190797 2.0kb downstream 2.0kb downstream 16805 true Chr09: 29046934-29063738 Phaseolus vulgaris
Phvul.009G190797 2.0kb downstream 2.0kb downstream 2000 false Chr09: 29061739-29063738 Phaseolus vulgaris
Phvul.009G190797 5.0kb upstream 5.0kb upstream 19805 true Chr09: 29041934-29061738 Phaseolus vulgaris
Phvul.009G190797 5.0kb upstream 5.0kb upstream 5000 false Chr09: 29041934-29046933 Phaseolus vulgaris
Phvul.009G190797 5.0kb downstream 5.0kb downstream 19805 true Chr09: 29046934-29066738 Phaseolus vulgaris
Phvul.009G190797 5.0kb downstream 5.0kb downstream 5000 false Chr09: 29061739-29066738 Phaseolus vulgaris
Phvul.009G190797 10.0kb upstream 10.0kb upstream 24805 true Chr09: 29036934-29061738 Phaseolus vulgaris
Phvul.009G190797 10.0kb upstream 10.0kb upstream 10000 false Chr09: 29036934-29046933 Phaseolus vulgaris
Phvul.009G190797 10.0kb downstream 10.0kb downstream 24805 true Chr09: 29046934-29071738 Phaseolus vulgaris
Phvul.009G190797 10.0kb downstream 10.0kb downstream 10000 false Chr09: 29061739-29071738 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311990 5265 Fabidae View MSA
124070666 5270 Rosid View MSA
123745187 5271 Pentapetalae View MSA
122795641 5272 Eudicot View MSA
122049598 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.567 0.0 58.5233    
cufflinks 14.0035 0.0 45.2165   Low
cufflinks 30.6781 0.0 109.905   High
cufflinks 24.5417 0.0 86.2904    
cufflinks 28.8475 0.0 101.998   High
cufflinks 27.0407 0.0 86.3867    
cufflinks 20.8654 0.0 73.2617    
cufflinks 13.2753 0.0 47.4094   Low
cufflinks 25.09 0.0 88.4124    
cufflinks 14.0881 0.0 50.4079   Low
cufflinks 24.7519 0.0 87.0448    

0 Strain