Gene : Phvul.009G192501 P. vulgaris v2.1
Defline:  (1 of 1) PF00004//PF02861 - ATPase family associated with various cellular activities (AAA) (AAA) // Clp amino terminal domain, pathogenicity island component (Clp_N) Genomic Order:  1978
Name:  ? Phvul.009G192501 Secondary Identifier:  ? PAC:37151353
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G192501 0.5kb upstream 0.5kb upstream 2481 true Chr09: 29310485-29312965 Phaseolus vulgaris
Phvul.009G192501 0.5kb upstream 0.5kb upstream 500 false Chr09: 29312466-29312965 Phaseolus vulgaris
Phvul.009G192501 0.5kb downstream 0.5kb downstream 2481 true Chr09: 29309985-29312465 Phaseolus vulgaris
Phvul.009G192501 0.5kb downstream 0.5kb downstream 500 false Chr09: 29309985-29310484 Phaseolus vulgaris
Phvul.009G192501 1.0kb upstream 1.0kb upstream 2981 true Chr09: 29310485-29313465 Phaseolus vulgaris
Phvul.009G192501 1.0kb upstream 1.0kb upstream 1000 false Chr09: 29312466-29313465 Phaseolus vulgaris
Phvul.009G192501 1.0kb downstream 1.0kb downstream 2981 true Chr09: 29309485-29312465 Phaseolus vulgaris
Phvul.009G192501 1.0kb downstream 1.0kb downstream 1000 false Chr09: 29309485-29310484 Phaseolus vulgaris
Phvul.009G192501 2.0kb upstream 2.0kb upstream 3981 true Chr09: 29310485-29314465 Phaseolus vulgaris
Phvul.009G192501 2.0kb upstream 2.0kb upstream 2000 false Chr09: 29312466-29314465 Phaseolus vulgaris
Phvul.009G192501 2.0kb downstream 2.0kb downstream 3981 true Chr09: 29308485-29312465 Phaseolus vulgaris
Phvul.009G192501 2.0kb downstream 2.0kb downstream 2000 false Chr09: 29308485-29310484 Phaseolus vulgaris
Phvul.009G192501 5.0kb upstream 5.0kb upstream 6981 true Chr09: 29310485-29317465 Phaseolus vulgaris
Phvul.009G192501 5.0kb upstream 5.0kb upstream 5000 false Chr09: 29312466-29317465 Phaseolus vulgaris
Phvul.009G192501 5.0kb downstream 5.0kb downstream 6981 true Chr09: 29305485-29312465 Phaseolus vulgaris
Phvul.009G192501 5.0kb downstream 5.0kb downstream 5000 false Chr09: 29305485-29310484 Phaseolus vulgaris
Phvul.009G192501 10.0kb upstream 10.0kb upstream 11981 true Chr09: 29310485-29322465 Phaseolus vulgaris
Phvul.009G192501 10.0kb upstream 10.0kb upstream 10000 false Chr09: 29312466-29322465 Phaseolus vulgaris
Phvul.009G192501 10.0kb downstream 10.0kb downstream 11981 true Chr09: 29300485-29312465 Phaseolus vulgaris
Phvul.009G192501 10.0kb downstream 10.0kb downstream 10000 false Chr09: 29300485-29310484 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312531 5265 Fabidae View MSA
124050481 5270 Rosid View MSA
123745437 5271 Pentapetalae View MSA
122797110 5272 Eudicot View MSA
122050456 5273 Angiosperm View MSA
121347252 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.316169 0.0 1.21355 Low  
cufflinks 1.14541 0.0 3.89684    
cufflinks 0.699312 0.0 2.52539    
cufflinks 0.407436 0.0 1.53536 Low  
cufflinks 0.954736 0.0 3.32273    
cufflinks 0.153426 0.0 0.623484 Low Low
cufflinks 0.618243 0.0 2.22998    
cufflinks 0.689375 0.0 2.47753    
cufflinks 0.762228 0.0 2.69681    
cufflinks 2.31811 0.0 7.27568   High
cufflinks 0.334113 0.0 1.2714 Low  

0 Strain