Gene : Phvul.009G178100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10093 - IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG Genomic Order:  1820
Name:  ? Phvul.009G178100 Secondary Identifier:  ? PAC:37150408
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G178100 0.5kb upstream 0.5kb upstream 2232 true Chr09: 26536224-26538455 Phaseolus vulgaris
Phvul.009G178100 0.5kb upstream 0.5kb upstream 500 false Chr09: 26536224-26536723 Phaseolus vulgaris
Phvul.009G178100 0.5kb downstream 0.5kb downstream 2232 true Chr09: 26536724-26538955 Phaseolus vulgaris
Phvul.009G178100 0.5kb downstream 0.5kb downstream 500 false Chr09: 26538456-26538955 Phaseolus vulgaris
Phvul.009G178100 1.0kb upstream 1.0kb upstream 2732 true Chr09: 26535724-26538455 Phaseolus vulgaris
Phvul.009G178100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 26535724-26536723 Phaseolus vulgaris
Phvul.009G178100 1.0kb downstream 1.0kb downstream 2732 true Chr09: 26536724-26539455 Phaseolus vulgaris
Phvul.009G178100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 26538456-26539455 Phaseolus vulgaris
Phvul.009G178100 2.0kb upstream 2.0kb upstream 3732 true Chr09: 26534724-26538455 Phaseolus vulgaris
Phvul.009G178100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 26534724-26536723 Phaseolus vulgaris
Phvul.009G178100 2.0kb downstream 2.0kb downstream 3732 true Chr09: 26536724-26540455 Phaseolus vulgaris
Phvul.009G178100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 26538456-26540455 Phaseolus vulgaris
Phvul.009G178100 5.0kb upstream 5.0kb upstream 6732 true Chr09: 26531724-26538455 Phaseolus vulgaris
Phvul.009G178100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 26531724-26536723 Phaseolus vulgaris
Phvul.009G178100 5.0kb downstream 5.0kb downstream 6732 true Chr09: 26536724-26543455 Phaseolus vulgaris
Phvul.009G178100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 26538456-26543455 Phaseolus vulgaris
Phvul.009G178100 10.0kb upstream 10.0kb upstream 11732 true Chr09: 26526724-26538455 Phaseolus vulgaris
Phvul.009G178100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 26526724-26536723 Phaseolus vulgaris
Phvul.009G178100 10.0kb downstream 10.0kb downstream 11732 true Chr09: 26536724-26548455 Phaseolus vulgaris
Phvul.009G178100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 26538456-26548455 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026522 5273 Angiosperm View MSA
122314473 5265 Fabidae View MSA
124069204 5270 Rosid View MSA
123746526 5271 Pentapetalae View MSA
122790333 5272 Eudicot View MSA
121348454 5274 Embryophyte View MSA
123428131 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.5078 0.0 159.309 High High
cufflinks 36.9615 0.0 96.0054 High  
cufflinks 62.1378 0.0 160.833 High High
cufflinks 64.0105 0.0 165.811 High High
cufflinks 27.1618 0.0 71.4755    
cufflinks 39.7004 0.0 102.943 High  
cufflinks 24.3441 0.0 64.3725    
cufflinks 19.2396 0.0 51.8985   Low
cufflinks 24.9503 0.0 65.8811    
cufflinks 33.9439 0.0 88.4363    
cufflinks 36.8185 0.0 95.5928 High  

0 Strain