Gene : Phvul.009G177000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10168:SF73 - GLUTAREDOXIN-C1 Genomic Order:  1809
Name:  ? Phvul.009G177000 Secondary Identifier:  ? PAC:37152064
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris THIOREDOX-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G177000 0.5kb upstream 0.5kb upstream 3333 true Chr09: 26357128-26360460 Phaseolus vulgaris
Phvul.009G177000 0.5kb upstream 0.5kb upstream 500 false Chr09: 26357128-26357627 Phaseolus vulgaris
Phvul.009G177000 0.5kb downstream 0.5kb downstream 3333 true Chr09: 26357628-26360960 Phaseolus vulgaris
Phvul.009G177000 0.5kb downstream 0.5kb downstream 500 false Chr09: 26360461-26360960 Phaseolus vulgaris
Phvul.009G177000 1.0kb upstream 1.0kb upstream 3833 true Chr09: 26356628-26360460 Phaseolus vulgaris
Phvul.009G177000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 26356628-26357627 Phaseolus vulgaris
Phvul.009G177000 1.0kb downstream 1.0kb downstream 3833 true Chr09: 26357628-26361460 Phaseolus vulgaris
Phvul.009G177000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 26360461-26361460 Phaseolus vulgaris
Phvul.009G177000 2.0kb upstream 2.0kb upstream 4833 true Chr09: 26355628-26360460 Phaseolus vulgaris
Phvul.009G177000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 26355628-26357627 Phaseolus vulgaris
Phvul.009G177000 2.0kb downstream 2.0kb downstream 4833 true Chr09: 26357628-26362460 Phaseolus vulgaris
Phvul.009G177000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 26360461-26362460 Phaseolus vulgaris
Phvul.009G177000 5.0kb upstream 5.0kb upstream 7833 true Chr09: 26352628-26360460 Phaseolus vulgaris
Phvul.009G177000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 26352628-26357627 Phaseolus vulgaris
Phvul.009G177000 5.0kb downstream 5.0kb downstream 7833 true Chr09: 26357628-26365460 Phaseolus vulgaris
Phvul.009G177000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 26360461-26365460 Phaseolus vulgaris
Phvul.009G177000 10.0kb upstream 10.0kb upstream 12833 true Chr09: 26347628-26360460 Phaseolus vulgaris
Phvul.009G177000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 26347628-26357627 Phaseolus vulgaris
Phvul.009G177000 10.0kb downstream 10.0kb downstream 12833 true Chr09: 26357628-26370460 Phaseolus vulgaris
Phvul.009G177000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 26360461-26370460 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310794 5265 Fabidae View MSA
124060631 5270 Rosid View MSA
123740735 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.8589 0.0 91.5132 High High
cufflinks 8.49987 0.0 25.3731    
cufflinks 6.6014 0.0 20.2293   Low
cufflinks 37.2443 0.0 97.749 High High
cufflinks 10.1788 0.0 30.0324    
cufflinks 6.47064 0.0 19.9056   Low
cufflinks 14.0095 0.0 39.5967    
cufflinks 13.5489 0.0 38.281    
cufflinks 12.9532 0.0 36.98    
cufflinks 8.67524 0.0 25.9241    
cufflinks 10.3449 0.0 30.3977    

0 Strain