Gene : Phvul.009G177300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12326 - PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN Genomic Order:  1812
Name:  ? Phvul.009G177300 Secondary Identifier:  ? PAC:37150183
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G177300 0.5kb upstream 0.5kb upstream 7350 true Chr09: 26393792-26401141 Phaseolus vulgaris
Phvul.009G177300 0.5kb upstream 0.5kb upstream 500 false Chr09: 26393792-26394291 Phaseolus vulgaris
Phvul.009G177300 0.5kb downstream 0.5kb downstream 7350 true Chr09: 26394292-26401641 Phaseolus vulgaris
Phvul.009G177300 0.5kb downstream 0.5kb downstream 500 false Chr09: 26401142-26401641 Phaseolus vulgaris
Phvul.009G177300 1.0kb upstream 1.0kb upstream 7850 true Chr09: 26393292-26401141 Phaseolus vulgaris
Phvul.009G177300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 26393292-26394291 Phaseolus vulgaris
Phvul.009G177300 1.0kb downstream 1.0kb downstream 7850 true Chr09: 26394292-26402141 Phaseolus vulgaris
Phvul.009G177300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 26401142-26402141 Phaseolus vulgaris
Phvul.009G177300 2.0kb upstream 2.0kb upstream 8850 true Chr09: 26392292-26401141 Phaseolus vulgaris
Phvul.009G177300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 26392292-26394291 Phaseolus vulgaris
Phvul.009G177300 2.0kb downstream 2.0kb downstream 8850 true Chr09: 26394292-26403141 Phaseolus vulgaris
Phvul.009G177300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 26401142-26403141 Phaseolus vulgaris
Phvul.009G177300 5.0kb upstream 5.0kb upstream 11850 true Chr09: 26389292-26401141 Phaseolus vulgaris
Phvul.009G177300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 26389292-26394291 Phaseolus vulgaris
Phvul.009G177300 5.0kb downstream 5.0kb downstream 11850 true Chr09: 26394292-26406141 Phaseolus vulgaris
Phvul.009G177300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 26401142-26406141 Phaseolus vulgaris
Phvul.009G177300 10.0kb upstream 10.0kb upstream 16850 true Chr09: 26384292-26401141 Phaseolus vulgaris
Phvul.009G177300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 26384292-26394291 Phaseolus vulgaris
Phvul.009G177300 10.0kb downstream 10.0kb downstream 16850 true Chr09: 26394292-26411141 Phaseolus vulgaris
Phvul.009G177300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 26401142-26411141 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300619 5265 Fabidae View MSA
124060618 5270 Rosid View MSA
123737398 5271 Pentapetalae View MSA
122793571 5272 Eudicot View MSA
122042332 5273 Angiosperm View MSA
121350531 5274 Embryophyte View MSA
123381775 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.59968 0.0 14.8224    
cufflinks 5.81575 0.0 15.3894    
cufflinks 8.75667 0.0 22.724    
cufflinks 3.93388 0.0 10.8048   Low
cufflinks 7.25523 0.0 18.9967    
cufflinks 6.94395 0.0 18.185    
cufflinks 9.3743 0.0 24.2765    
cufflinks 7.56697 0.0 19.7059    
cufflinks 8.65445 0.0 22.4727    
cufflinks 12.8072 0.0 33.1136   High
cufflinks 6.53536 0.0 17.1809    

0 Strain