Gene : Phvul.009G179500 P. vulgaris v2.1
Defline:  (1 of 11) PF03181 - BURP domain (BURP) Genomic Order:  1834
Name:  ? Phvul.009G179500 Secondary Identifier:  ? PAC:37150481
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G179500 0.5kb upstream 0.5kb upstream 2945 true Chr09: 26920188-26923132 Phaseolus vulgaris
Phvul.009G179500 0.5kb upstream 0.5kb upstream 500 false Chr09: 26920188-26920687 Phaseolus vulgaris
Phvul.009G179500 0.5kb downstream 0.5kb downstream 2945 true Chr09: 26920688-26923632 Phaseolus vulgaris
Phvul.009G179500 0.5kb downstream 0.5kb downstream 500 false Chr09: 26923133-26923632 Phaseolus vulgaris
Phvul.009G179500 1.0kb upstream 1.0kb upstream 3445 true Chr09: 26919688-26923132 Phaseolus vulgaris
Phvul.009G179500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 26919688-26920687 Phaseolus vulgaris
Phvul.009G179500 1.0kb downstream 1.0kb downstream 3445 true Chr09: 26920688-26924132 Phaseolus vulgaris
Phvul.009G179500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 26923133-26924132 Phaseolus vulgaris
Phvul.009G179500 2.0kb upstream 2.0kb upstream 4445 true Chr09: 26918688-26923132 Phaseolus vulgaris
Phvul.009G179500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 26918688-26920687 Phaseolus vulgaris
Phvul.009G179500 2.0kb downstream 2.0kb downstream 4445 true Chr09: 26920688-26925132 Phaseolus vulgaris
Phvul.009G179500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 26923133-26925132 Phaseolus vulgaris
Phvul.009G179500 5.0kb upstream 5.0kb upstream 7445 true Chr09: 26915688-26923132 Phaseolus vulgaris
Phvul.009G179500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 26915688-26920687 Phaseolus vulgaris
Phvul.009G179500 5.0kb downstream 5.0kb downstream 7445 true Chr09: 26920688-26928132 Phaseolus vulgaris
Phvul.009G179500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 26923133-26928132 Phaseolus vulgaris
Phvul.009G179500 10.0kb upstream 10.0kb upstream 12445 true Chr09: 26910688-26923132 Phaseolus vulgaris
Phvul.009G179500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 26910688-26920687 Phaseolus vulgaris
Phvul.009G179500 10.0kb downstream 10.0kb downstream 12445 true Chr09: 26920688-26933132 Phaseolus vulgaris
Phvul.009G179500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 26923133-26933132 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310118 5265 Fabidae View MSA
124071766 5270 Rosid View MSA
123746875 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.61569 0.0 9.48037    
cufflinks 10.6395 0.0 34.9978    
cufflinks 2.19112 0.0 9.14935    
cufflinks 1.99361 0.0 6.29927    
cufflinks 6.91778 0.0 24.4983    
cufflinks 15.0418 0.0 48.8599   High
cufflinks 3.76012 0.0 15.026    
cufflinks 2.88435 0.0 10.2775    
cufflinks 6.76913 0.0 23.7352    
cufflinks 0.0917419 0.0 0.376052 Low Low
cufflinks 6.92184 0.0 24.4942    

0 Strain