Gene : Phvul.009G183200 P. vulgaris v2.1
Defline:  (1 of 13) PF02985 - HEAT repeat (HEAT) Genomic Order:  1871
Name:  ? Phvul.009G183200 Secondary Identifier:  ? PAC:37151109
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G183200 0.5kb upstream 0.5kb upstream 5120 true Chr09: 27574209-27579328 Phaseolus vulgaris
Phvul.009G183200 0.5kb upstream 0.5kb upstream 500 false Chr09: 27574209-27574708 Phaseolus vulgaris
Phvul.009G183200 0.5kb downstream 0.5kb downstream 5120 true Chr09: 27574709-27579828 Phaseolus vulgaris
Phvul.009G183200 0.5kb downstream 0.5kb downstream 500 false Chr09: 27579329-27579828 Phaseolus vulgaris
Phvul.009G183200 1.0kb upstream 1.0kb upstream 5620 true Chr09: 27573709-27579328 Phaseolus vulgaris
Phvul.009G183200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27573709-27574708 Phaseolus vulgaris
Phvul.009G183200 1.0kb downstream 1.0kb downstream 5620 true Chr09: 27574709-27580328 Phaseolus vulgaris
Phvul.009G183200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27579329-27580328 Phaseolus vulgaris
Phvul.009G183200 2.0kb upstream 2.0kb upstream 6620 true Chr09: 27572709-27579328 Phaseolus vulgaris
Phvul.009G183200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27572709-27574708 Phaseolus vulgaris
Phvul.009G183200 2.0kb downstream 2.0kb downstream 6620 true Chr09: 27574709-27581328 Phaseolus vulgaris
Phvul.009G183200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27579329-27581328 Phaseolus vulgaris
Phvul.009G183200 5.0kb upstream 5.0kb upstream 9620 true Chr09: 27569709-27579328 Phaseolus vulgaris
Phvul.009G183200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27569709-27574708 Phaseolus vulgaris
Phvul.009G183200 5.0kb downstream 5.0kb downstream 9620 true Chr09: 27574709-27584328 Phaseolus vulgaris
Phvul.009G183200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27579329-27584328 Phaseolus vulgaris
Phvul.009G183200 10.0kb upstream 10.0kb upstream 14620 true Chr09: 27564709-27579328 Phaseolus vulgaris
Phvul.009G183200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27564709-27574708 Phaseolus vulgaris
Phvul.009G183200 10.0kb downstream 10.0kb downstream 14620 true Chr09: 27574709-27589328 Phaseolus vulgaris
Phvul.009G183200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27579329-27589328 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041018 5273 Angiosperm View MSA
122311359 5265 Fabidae View MSA
124069706 5270 Rosid View MSA
123745990 5271 Pentapetalae View MSA
122793911 5272 Eudicot View MSA
121309785 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.26255 0.0 30.3002   Low
cufflinks 23.8748 0.0 76.8631    
cufflinks 19.6838 0.0 62.5017    
cufflinks 41.3226 0.0 144.975 High  
cufflinks 39.8554 0.0 138.113 High  
cufflinks 20.8521 0.0 66.4664    
cufflinks 23.9911 0.0 77.8285    
cufflinks 16.4655 0.0 52.217    
cufflinks 22.4207 0.0 72.1003    
cufflinks 48.4289 0.0 155.985 High High
cufflinks 45.0184 0.0 160.72 High High

0 Strain