Gene : Phvul.009G183300 P. vulgaris v2.1
Defline:  (1 of 6) PTHR12374:SF26 - F25A4.19 PROTEIN Genomic Order:  1872
Name:  ? Phvul.009G183300 Secondary Identifier:  ? PAC:37151708
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G183300 0.5kb upstream 0.5kb upstream 4020 true Chr09: 27603193-27607212 Phaseolus vulgaris
Phvul.009G183300 0.5kb upstream 0.5kb upstream 500 false Chr09: 27603193-27603692 Phaseolus vulgaris
Phvul.009G183300 0.5kb downstream 0.5kb downstream 4020 true Chr09: 27603693-27607712 Phaseolus vulgaris
Phvul.009G183300 0.5kb downstream 0.5kb downstream 500 false Chr09: 27607213-27607712 Phaseolus vulgaris
Phvul.009G183300 1.0kb upstream 1.0kb upstream 4520 true Chr09: 27602693-27607212 Phaseolus vulgaris
Phvul.009G183300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27602693-27603692 Phaseolus vulgaris
Phvul.009G183300 1.0kb downstream 1.0kb downstream 4520 true Chr09: 27603693-27608212 Phaseolus vulgaris
Phvul.009G183300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27607213-27608212 Phaseolus vulgaris
Phvul.009G183300 2.0kb upstream 2.0kb upstream 5520 true Chr09: 27601693-27607212 Phaseolus vulgaris
Phvul.009G183300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27601693-27603692 Phaseolus vulgaris
Phvul.009G183300 2.0kb downstream 2.0kb downstream 5520 true Chr09: 27603693-27609212 Phaseolus vulgaris
Phvul.009G183300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27607213-27609212 Phaseolus vulgaris
Phvul.009G183300 5.0kb upstream 5.0kb upstream 8520 true Chr09: 27598693-27607212 Phaseolus vulgaris
Phvul.009G183300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27598693-27603692 Phaseolus vulgaris
Phvul.009G183300 5.0kb downstream 5.0kb downstream 8520 true Chr09: 27603693-27612212 Phaseolus vulgaris
Phvul.009G183300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27607213-27612212 Phaseolus vulgaris
Phvul.009G183300 10.0kb upstream 10.0kb upstream 13520 true Chr09: 27593693-27607212 Phaseolus vulgaris
Phvul.009G183300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27593693-27603692 Phaseolus vulgaris
Phvul.009G183300 10.0kb downstream 10.0kb downstream 13520 true Chr09: 27603693-27617212 Phaseolus vulgaris
Phvul.009G183300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27607213-27617212 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310492 5265 Fabidae View MSA
124069217 5270 Rosid View MSA
123738697 5271 Pentapetalae View MSA
122794974 5272 Eudicot View MSA
122050347 5273 Angiosperm View MSA
121350990 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2665 0.0 43.0366    
cufflinks 26.5279 0.0 68.7266    
cufflinks 6.47987 0.0 18.5333   Low
cufflinks 24.1879 0.0 62.7534    
cufflinks 49.4858 0.0 128.76 High  
cufflinks 4.45381 0.0 13.292   Low
cufflinks 26.7991 0.0 69.3511    
cufflinks 37.2049 0.0 96.2392 High  
cufflinks 43.6376 0.0 113.321 High  
cufflinks 44.1853 0.0 114.603 High  
cufflinks 34.715 0.0 89.74 High  

0 Strain