Gene : Phvul.009G169700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10694:SF38 - LYSINE-SPECIFIC DEMETHYLASE REF6 Genomic Order:  1737
Name:  ? Phvul.009G169700 Secondary Identifier:  ? PAC:37149414
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G169700 0.5kb upstream 0.5kb upstream 10339 true Chr09: 25267258-25277596 Phaseolus vulgaris
Phvul.009G169700 0.5kb upstream 0.5kb upstream 500 false Chr09: 25277097-25277596 Phaseolus vulgaris
Phvul.009G169700 0.5kb downstream 0.5kb downstream 10339 true Chr09: 25266758-25277096 Phaseolus vulgaris
Phvul.009G169700 0.5kb downstream 0.5kb downstream 500 false Chr09: 25266758-25267257 Phaseolus vulgaris
Phvul.009G169700 1.0kb upstream 1.0kb upstream 10839 true Chr09: 25267258-25278096 Phaseolus vulgaris
Phvul.009G169700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25277097-25278096 Phaseolus vulgaris
Phvul.009G169700 1.0kb downstream 1.0kb downstream 10839 true Chr09: 25266258-25277096 Phaseolus vulgaris
Phvul.009G169700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25266258-25267257 Phaseolus vulgaris
Phvul.009G169700 2.0kb upstream 2.0kb upstream 11839 true Chr09: 25267258-25279096 Phaseolus vulgaris
Phvul.009G169700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25277097-25279096 Phaseolus vulgaris
Phvul.009G169700 2.0kb downstream 2.0kb downstream 11839 true Chr09: 25265258-25277096 Phaseolus vulgaris
Phvul.009G169700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25265258-25267257 Phaseolus vulgaris
Phvul.009G169700 5.0kb upstream 5.0kb upstream 14839 true Chr09: 25267258-25282096 Phaseolus vulgaris
Phvul.009G169700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25277097-25282096 Phaseolus vulgaris
Phvul.009G169700 5.0kb downstream 5.0kb downstream 14839 true Chr09: 25262258-25277096 Phaseolus vulgaris
Phvul.009G169700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25262258-25267257 Phaseolus vulgaris
Phvul.009G169700 10.0kb upstream 10.0kb upstream 19839 true Chr09: 25267258-25287096 Phaseolus vulgaris
Phvul.009G169700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25277097-25287096 Phaseolus vulgaris
Phvul.009G169700 10.0kb downstream 10.0kb downstream 19839 true Chr09: 25257258-25277096 Phaseolus vulgaris
Phvul.009G169700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25257258-25267257 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314341 5265 Fabidae View MSA
124060683 5270 Rosid View MSA
123752621 5271 Pentapetalae View MSA
122794300 5272 Eudicot View MSA
122042363 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121351254 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01301 0.0 2.98807   Low
cufflinks 6.17092 0.0 15.9597    
cufflinks 9.91368 0.0 25.7847    
cufflinks 1.61459 0.0 4.56334   Low
cufflinks 6.56744 0.0 16.9828    
cufflinks 14.776 0.0 39.2683   High
cufflinks 8.61092 0.0 22.3284    
cufflinks 8.44049 0.0 21.8795    
cufflinks 9.88338 0.0 25.7254    
cufflinks 6.99248 0.0 18.0742    
cufflinks 5.82906 0.0 15.0908    

0 Strain