Gene : Phvul.009G172300 P. vulgaris v2.1
Defline:  (1 of 4) K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Genomic Order:  1763
Name:  ? Phvul.009G172300 Secondary Identifier:  ? PAC:37151669
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G172300 0.5kb upstream 0.5kb upstream 2179 true Chr09: 25599928-25602106 Phaseolus vulgaris
Phvul.009G172300 0.5kb upstream 0.5kb upstream 500 false Chr09: 25601607-25602106 Phaseolus vulgaris
Phvul.009G172300 0.5kb downstream 0.5kb downstream 2179 true Chr09: 25599428-25601606 Phaseolus vulgaris
Phvul.009G172300 0.5kb downstream 0.5kb downstream 500 false Chr09: 25599428-25599927 Phaseolus vulgaris
Phvul.009G172300 1.0kb upstream 1.0kb upstream 2679 true Chr09: 25599928-25602606 Phaseolus vulgaris
Phvul.009G172300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25601607-25602606 Phaseolus vulgaris
Phvul.009G172300 1.0kb downstream 1.0kb downstream 2679 true Chr09: 25598928-25601606 Phaseolus vulgaris
Phvul.009G172300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25598928-25599927 Phaseolus vulgaris
Phvul.009G172300 2.0kb upstream 2.0kb upstream 3679 true Chr09: 25599928-25603606 Phaseolus vulgaris
Phvul.009G172300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25601607-25603606 Phaseolus vulgaris
Phvul.009G172300 2.0kb downstream 2.0kb downstream 3679 true Chr09: 25597928-25601606 Phaseolus vulgaris
Phvul.009G172300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25597928-25599927 Phaseolus vulgaris
Phvul.009G172300 5.0kb upstream 5.0kb upstream 6679 true Chr09: 25599928-25606606 Phaseolus vulgaris
Phvul.009G172300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25601607-25606606 Phaseolus vulgaris
Phvul.009G172300 5.0kb downstream 5.0kb downstream 6679 true Chr09: 25594928-25601606 Phaseolus vulgaris
Phvul.009G172300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25594928-25599927 Phaseolus vulgaris
Phvul.009G172300 10.0kb upstream 10.0kb upstream 11679 true Chr09: 25599928-25611606 Phaseolus vulgaris
Phvul.009G172300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25601607-25611606 Phaseolus vulgaris
Phvul.009G172300 10.0kb downstream 10.0kb downstream 11679 true Chr09: 25589928-25601606 Phaseolus vulgaris
Phvul.009G172300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25589928-25599927 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253803 5265 Fabidae View MSA
124071399 5270 Rosid View MSA
123748066 5271 Pentapetalae View MSA
122790013 5272 Eudicot View MSA
122042868 5273 Angiosperm View MSA
121345250 5274 Embryophyte View MSA
123426931 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 254.041 0.0 752.979 High  
cufflinks 372.013 0.0 1181.9 High High
cufflinks 186.054 0.0 530.163 High Low
cufflinks 413.383 0.0 1351.27 High High
cufflinks 337.572 0.0 1055.37 High  
cufflinks 154.615 0.0 433.253 High Low
cufflinks 218.645 0.0 648.64 High  
cufflinks 254.372 0.0 762.501 High  
cufflinks 288.084 0.0 892.41 High  
cufflinks 204.519 0.0 590.125 High  
cufflinks 300.3 0.0 929.106 High  

0 Strain