Gene : Phvul.009G170400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11669:SF3 - PROTEIN STICHEL-LIKE 2 Genomic Order:  1744
Name:  ? Phvul.009G170400 Secondary Identifier:  ? PAC:37150163
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G170400 0.5kb upstream 0.5kb upstream 5378 true Chr09: 25364535-25369912 Phaseolus vulgaris
Phvul.009G170400 0.5kb upstream 0.5kb upstream 500 false Chr09: 25369413-25369912 Phaseolus vulgaris
Phvul.009G170400 0.5kb downstream 0.5kb downstream 5378 true Chr09: 25364035-25369412 Phaseolus vulgaris
Phvul.009G170400 0.5kb downstream 0.5kb downstream 500 false Chr09: 25364035-25364534 Phaseolus vulgaris
Phvul.009G170400 1.0kb upstream 1.0kb upstream 5878 true Chr09: 25364535-25370412 Phaseolus vulgaris
Phvul.009G170400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25369413-25370412 Phaseolus vulgaris
Phvul.009G170400 1.0kb downstream 1.0kb downstream 5878 true Chr09: 25363535-25369412 Phaseolus vulgaris
Phvul.009G170400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25363535-25364534 Phaseolus vulgaris
Phvul.009G170400 2.0kb upstream 2.0kb upstream 6878 true Chr09: 25364535-25371412 Phaseolus vulgaris
Phvul.009G170400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25369413-25371412 Phaseolus vulgaris
Phvul.009G170400 2.0kb downstream 2.0kb downstream 6878 true Chr09: 25362535-25369412 Phaseolus vulgaris
Phvul.009G170400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25362535-25364534 Phaseolus vulgaris
Phvul.009G170400 5.0kb upstream 5.0kb upstream 9878 true Chr09: 25364535-25374412 Phaseolus vulgaris
Phvul.009G170400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25369413-25374412 Phaseolus vulgaris
Phvul.009G170400 5.0kb downstream 5.0kb downstream 9878 true Chr09: 25359535-25369412 Phaseolus vulgaris
Phvul.009G170400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25359535-25364534 Phaseolus vulgaris
Phvul.009G170400 10.0kb upstream 10.0kb upstream 14878 true Chr09: 25364535-25379412 Phaseolus vulgaris
Phvul.009G170400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25369413-25379412 Phaseolus vulgaris
Phvul.009G170400 10.0kb downstream 10.0kb downstream 14878 true Chr09: 25354535-25369412 Phaseolus vulgaris
Phvul.009G170400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25354535-25364534 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311123 5265 Fabidae View MSA
124063569 5270 Rosid View MSA
123738968 5271 Pentapetalae View MSA
122794041 5272 Eudicot View MSA
122048856 5273 Angiosperm View MSA
121350538 5274 Embryophyte View MSA
123381780 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.206658 0.0 0.954653 Low  
cufflinks 0.385049 0.0 2.23653 Low  
cufflinks 0.640505 0.0 3.2314    
cufflinks 0.106584 0.0 0.428691 Low  
cufflinks 0.372404 0.0 1.64396 Low  
cufflinks 2.92289 0.0 10.0869   High
cufflinks 0.737302 0.0 3.73705    
cufflinks 0.438663 0.0 2.46 Low  
cufflinks 0.855943 0.0 4.09292    
cufflinks 0.00555101 0.0 0.0404207 Low Low
cufflinks 0.714073 0.0 2.80087    

0 Strain