Gene : Phvul.009G171200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR27000:SF9 - LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE/TYROSINE-PROTEIN KINASE SOBIR1 Genomic Order:  1752
Name:  ? Phvul.009G171200 Secondary Identifier:  ? PAC:37149187
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G171200 0.5kb upstream 0.5kb upstream 2860 true Chr09: 25476450-25479309 Phaseolus vulgaris
Phvul.009G171200 0.5kb upstream 0.5kb upstream 500 false Chr09: 25478810-25479309 Phaseolus vulgaris
Phvul.009G171200 0.5kb downstream 0.5kb downstream 2860 true Chr09: 25475950-25478809 Phaseolus vulgaris
Phvul.009G171200 0.5kb downstream 0.5kb downstream 500 false Chr09: 25475950-25476449 Phaseolus vulgaris
Phvul.009G171200 1.0kb upstream 1.0kb upstream 3360 true Chr09: 25476450-25479809 Phaseolus vulgaris
Phvul.009G171200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25478810-25479809 Phaseolus vulgaris
Phvul.009G171200 1.0kb downstream 1.0kb downstream 3360 true Chr09: 25475450-25478809 Phaseolus vulgaris
Phvul.009G171200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25475450-25476449 Phaseolus vulgaris
Phvul.009G171200 2.0kb upstream 2.0kb upstream 4360 true Chr09: 25476450-25480809 Phaseolus vulgaris
Phvul.009G171200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25478810-25480809 Phaseolus vulgaris
Phvul.009G171200 2.0kb downstream 2.0kb downstream 4360 true Chr09: 25474450-25478809 Phaseolus vulgaris
Phvul.009G171200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25474450-25476449 Phaseolus vulgaris
Phvul.009G171200 5.0kb upstream 5.0kb upstream 7360 true Chr09: 25476450-25483809 Phaseolus vulgaris
Phvul.009G171200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25478810-25483809 Phaseolus vulgaris
Phvul.009G171200 5.0kb downstream 5.0kb downstream 7360 true Chr09: 25471450-25478809 Phaseolus vulgaris
Phvul.009G171200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25471450-25476449 Phaseolus vulgaris
Phvul.009G171200 10.0kb upstream 10.0kb upstream 12360 true Chr09: 25476450-25488809 Phaseolus vulgaris
Phvul.009G171200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25478810-25488809 Phaseolus vulgaris
Phvul.009G171200 10.0kb downstream 10.0kb downstream 12360 true Chr09: 25466450-25478809 Phaseolus vulgaris
Phvul.009G171200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25466450-25476449 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303317 5265 Fabidae View MSA
124066078 5270 Rosid View MSA
123748956 5271 Pentapetalae View MSA
122785949 5272 Eudicot View MSA
122046333 5273 Angiosperm View MSA
121347860 5274 Embryophyte View MSA
123380655 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.34822 0.0 17.2455    
cufflinks 3.77583 0.0 10.7487   Low
cufflinks 6.51503 0.0 17.6698    
cufflinks 4.88173 0.0 13.5871   Low
cufflinks 9.94512 0.0 26.1669    
cufflinks 15.9382 0.0 41.23    
cufflinks 31.6303 0.0 83.0721 High High
cufflinks 16.5479 0.0 42.7825    
cufflinks 5.85346 0.0 15.9958    
cufflinks 21.2037 0.0 54.8601    
cufflinks 23.2374 0.0 60.2172   High

0 Strain