Gene : Phvul.009G175200 P. vulgaris v2.1
Defline:  (1 of 48) PF03195 - Protein of unknown function DUF260 (DUF260) Genomic Order:  1792
Name:  ? Phvul.009G175200 Secondary Identifier:  ? PAC:37150904
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G175200 0.5kb upstream 0.5kb upstream 2916 true Chr09: 26024466-26027381 Phaseolus vulgaris
Phvul.009G175200 0.5kb upstream 0.5kb upstream 500 false Chr09: 26024466-26024965 Phaseolus vulgaris
Phvul.009G175200 0.5kb downstream 0.5kb downstream 2916 true Chr09: 26024966-26027881 Phaseolus vulgaris
Phvul.009G175200 0.5kb downstream 0.5kb downstream 500 false Chr09: 26027382-26027881 Phaseolus vulgaris
Phvul.009G175200 1.0kb upstream 1.0kb upstream 3416 true Chr09: 26023966-26027381 Phaseolus vulgaris
Phvul.009G175200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 26023966-26024965 Phaseolus vulgaris
Phvul.009G175200 1.0kb downstream 1.0kb downstream 3416 true Chr09: 26024966-26028381 Phaseolus vulgaris
Phvul.009G175200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 26027382-26028381 Phaseolus vulgaris
Phvul.009G175200 2.0kb upstream 2.0kb upstream 4416 true Chr09: 26022966-26027381 Phaseolus vulgaris
Phvul.009G175200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 26022966-26024965 Phaseolus vulgaris
Phvul.009G175200 2.0kb downstream 2.0kb downstream 4416 true Chr09: 26024966-26029381 Phaseolus vulgaris
Phvul.009G175200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 26027382-26029381 Phaseolus vulgaris
Phvul.009G175200 5.0kb upstream 5.0kb upstream 7416 true Chr09: 26019966-26027381 Phaseolus vulgaris
Phvul.009G175200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 26019966-26024965 Phaseolus vulgaris
Phvul.009G175200 5.0kb downstream 5.0kb downstream 7416 true Chr09: 26024966-26032381 Phaseolus vulgaris
Phvul.009G175200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 26027382-26032381 Phaseolus vulgaris
Phvul.009G175200 10.0kb upstream 10.0kb upstream 12416 true Chr09: 26014966-26027381 Phaseolus vulgaris
Phvul.009G175200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 26014966-26024965 Phaseolus vulgaris
Phvul.009G175200 10.0kb downstream 10.0kb downstream 12416 true Chr09: 26024966-26037381 Phaseolus vulgaris
Phvul.009G175200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 26027382-26037381 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313203 5265 Fabidae View MSA
124070294 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0614944 0.0 0.283052 Low Low
cufflinks 0.0578461 0.0 0.268163 Low Low
cufflinks 0.0523617 0.0 0.244566 Low Low
cufflinks 0.692385 0.0 2.59053    
cufflinks 0.583971 0.0 2.21917 Low  
cufflinks 0.155911 0.0 0.655334 Low  
cufflinks 1.25871 0.0 4.44942   High
cufflinks 0.554477 0.0 2.10661    
cufflinks 0.936861 0.0 3.41213    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.66763 0.0 5.75713   High

0 Strain