Gene : Phvul.009G163800 P. vulgaris v2.1
Defline:  (1 of 2) K12832 - splicing factor 3B subunit 5 (SF3B5, SF3B10) Genomic Order:  1679
Name:  ? Phvul.009G163800 Secondary Identifier:  ? PAC:37150754
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G163800 0.5kb upstream 0.5kb upstream 4192 true Chr09: 24334684-24338875 Phaseolus vulgaris
Phvul.009G163800 0.5kb upstream 0.5kb upstream 500 false Chr09: 24338376-24338875 Phaseolus vulgaris
Phvul.009G163800 0.5kb downstream 0.5kb downstream 4192 true Chr09: 24334184-24338375 Phaseolus vulgaris
Phvul.009G163800 0.5kb downstream 0.5kb downstream 500 false Chr09: 24334184-24334683 Phaseolus vulgaris
Phvul.009G163800 1.0kb upstream 1.0kb upstream 4692 true Chr09: 24334684-24339375 Phaseolus vulgaris
Phvul.009G163800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24338376-24339375 Phaseolus vulgaris
Phvul.009G163800 1.0kb downstream 1.0kb downstream 4692 true Chr09: 24333684-24338375 Phaseolus vulgaris
Phvul.009G163800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24333684-24334683 Phaseolus vulgaris
Phvul.009G163800 2.0kb upstream 2.0kb upstream 5692 true Chr09: 24334684-24340375 Phaseolus vulgaris
Phvul.009G163800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24338376-24340375 Phaseolus vulgaris
Phvul.009G163800 2.0kb downstream 2.0kb downstream 5692 true Chr09: 24332684-24338375 Phaseolus vulgaris
Phvul.009G163800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24332684-24334683 Phaseolus vulgaris
Phvul.009G163800 5.0kb upstream 5.0kb upstream 8692 true Chr09: 24334684-24343375 Phaseolus vulgaris
Phvul.009G163800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24338376-24343375 Phaseolus vulgaris
Phvul.009G163800 5.0kb downstream 5.0kb downstream 8692 true Chr09: 24329684-24338375 Phaseolus vulgaris
Phvul.009G163800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24329684-24334683 Phaseolus vulgaris
Phvul.009G163800 10.0kb upstream 10.0kb upstream 13692 true Chr09: 24334684-24348375 Phaseolus vulgaris
Phvul.009G163800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24338376-24348375 Phaseolus vulgaris
Phvul.009G163800 10.0kb downstream 10.0kb downstream 13692 true Chr09: 24324684-24338375 Phaseolus vulgaris
Phvul.009G163800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24324684-24334683 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617006 5273 Angiosperm Singleton cluster - no MSA
122252744 5265 Fabidae Singleton cluster - no MSA
123995447 5270 Rosid Singleton cluster - no MSA
123570040 5271 Pentapetalae Singleton cluster - no MSA
122604779 5272 Eudicot Singleton cluster - no MSA
120889171 5274 Embryophyte Singleton cluster - no MSA
122929905 5275 Viridiplantae Singleton cluster - no MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.27904 0.0 10.4902    
cufflinks 1.09591 0.0 5.47364   Low
cufflinks 6.2137 0.0 26.0894   High
cufflinks 1.71969 0.0 7.98821    
cufflinks 2.19246 0.0 10.2948    
cufflinks 1.60056 0.0 7.71714    
cufflinks 1.30254 0.0 6.37921    
cufflinks 4.01262 0.0 17.57   High
cufflinks 2.67298 0.0 12.0778    
cufflinks 1.26308 0.0 6.23462    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain