Gene : Phvul.009G164300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12565:SF90 - TRANSCRIPTION FACTOR BHLH137 Genomic Order:  1684
Name:  ? Phvul.009G164300 Secondary Identifier:  ? PAC:37149097
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G164300 0.5kb upstream 0.5kb upstream 3375 true Chr09: 24414840-24418214 Phaseolus vulgaris
Phvul.009G164300 0.5kb upstream 0.5kb upstream 500 false Chr09: 24417715-24418214 Phaseolus vulgaris
Phvul.009G164300 0.5kb downstream 0.5kb downstream 3375 true Chr09: 24414340-24417714 Phaseolus vulgaris
Phvul.009G164300 0.5kb downstream 0.5kb downstream 500 false Chr09: 24414340-24414839 Phaseolus vulgaris
Phvul.009G164300 1.0kb upstream 1.0kb upstream 3875 true Chr09: 24414840-24418714 Phaseolus vulgaris
Phvul.009G164300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24417715-24418714 Phaseolus vulgaris
Phvul.009G164300 1.0kb downstream 1.0kb downstream 3875 true Chr09: 24413840-24417714 Phaseolus vulgaris
Phvul.009G164300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24413840-24414839 Phaseolus vulgaris
Phvul.009G164300 2.0kb upstream 2.0kb upstream 4875 true Chr09: 24414840-24419714 Phaseolus vulgaris
Phvul.009G164300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24417715-24419714 Phaseolus vulgaris
Phvul.009G164300 2.0kb downstream 2.0kb downstream 4875 true Chr09: 24412840-24417714 Phaseolus vulgaris
Phvul.009G164300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24412840-24414839 Phaseolus vulgaris
Phvul.009G164300 5.0kb upstream 5.0kb upstream 7875 true Chr09: 24414840-24422714 Phaseolus vulgaris
Phvul.009G164300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24417715-24422714 Phaseolus vulgaris
Phvul.009G164300 5.0kb downstream 5.0kb downstream 7875 true Chr09: 24409840-24417714 Phaseolus vulgaris
Phvul.009G164300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24409840-24414839 Phaseolus vulgaris
Phvul.009G164300 10.0kb upstream 10.0kb upstream 12875 true Chr09: 24414840-24427714 Phaseolus vulgaris
Phvul.009G164300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24417715-24427714 Phaseolus vulgaris
Phvul.009G164300 10.0kb downstream 10.0kb downstream 12875 true Chr09: 24404840-24417714 Phaseolus vulgaris
Phvul.009G164300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24404840-24414839 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311083 5265 Fabidae View MSA
124068210 5270 Rosid View MSA
123746913 5271 Pentapetalae View MSA
122796649 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.24444 0.0 17.4594    
cufflinks 17.5866 0.0 45.7002    
cufflinks 19.9089 0.0 51.5436    
cufflinks 3.89221 0.0 11.4582    
cufflinks 19.1955 0.0 49.8734    
cufflinks 8.7961 0.0 23.8187    
cufflinks 1.17339 0.0 3.91964   Low
cufflinks 1.43619 0.0 4.68316   Low
cufflinks 0.964178 0.0 3.28742   Low
cufflinks 48.1103 0.0 126.622 High High
cufflinks 12.1191 0.0 32.1954    

0 Strain