Gene : Phvul.009G165500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31956:SF2 - NON-SPECIFIC PHOSPHOLIPASE C6 Genomic Order:  1696
Name:  ? Phvul.009G165500 Secondary Identifier:  ? PAC:37149478
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G165500 0.5kb upstream 0.5kb upstream 3729 true Chr09: 24668365-24672093 Phaseolus vulgaris
Phvul.009G165500 0.5kb upstream 0.5kb upstream 500 false Chr09: 24668365-24668864 Phaseolus vulgaris
Phvul.009G165500 0.5kb downstream 0.5kb downstream 3729 true Chr09: 24668865-24672593 Phaseolus vulgaris
Phvul.009G165500 0.5kb downstream 0.5kb downstream 500 false Chr09: 24672094-24672593 Phaseolus vulgaris
Phvul.009G165500 1.0kb upstream 1.0kb upstream 4229 true Chr09: 24667865-24672093 Phaseolus vulgaris
Phvul.009G165500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24667865-24668864 Phaseolus vulgaris
Phvul.009G165500 1.0kb downstream 1.0kb downstream 4229 true Chr09: 24668865-24673093 Phaseolus vulgaris
Phvul.009G165500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24672094-24673093 Phaseolus vulgaris
Phvul.009G165500 2.0kb upstream 2.0kb upstream 5229 true Chr09: 24666865-24672093 Phaseolus vulgaris
Phvul.009G165500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24666865-24668864 Phaseolus vulgaris
Phvul.009G165500 2.0kb downstream 2.0kb downstream 5229 true Chr09: 24668865-24674093 Phaseolus vulgaris
Phvul.009G165500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24672094-24674093 Phaseolus vulgaris
Phvul.009G165500 5.0kb upstream 5.0kb upstream 8229 true Chr09: 24663865-24672093 Phaseolus vulgaris
Phvul.009G165500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24663865-24668864 Phaseolus vulgaris
Phvul.009G165500 5.0kb downstream 5.0kb downstream 8229 true Chr09: 24668865-24677093 Phaseolus vulgaris
Phvul.009G165500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24672094-24677093 Phaseolus vulgaris
Phvul.009G165500 10.0kb upstream 10.0kb upstream 13229 true Chr09: 24658865-24672093 Phaseolus vulgaris
Phvul.009G165500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24658865-24668864 Phaseolus vulgaris
Phvul.009G165500 10.0kb downstream 10.0kb downstream 13229 true Chr09: 24668865-24682093 Phaseolus vulgaris
Phvul.009G165500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24672094-24682093 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307803 5265 Fabidae View MSA
124067209 5270 Rosid View MSA
123741370 5271 Pentapetalae View MSA
122788110 5272 Eudicot View MSA
122046381 5273 Angiosperm View MSA
121310596 5274 Embryophyte View MSA
123348041 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.56638 0.0 7.67412   Low
cufflinks 7.79983 0.0 20.967    
cufflinks 15.3829 0.0 39.8519    
cufflinks 4.18838 0.0 11.9543   Low
cufflinks 17.1596 0.0 44.4166    
cufflinks 18.2504 0.0 47.1851    
cufflinks 8.63244 0.0 23.0091    
cufflinks 8.01431 0.0 21.4291    
cufflinks 6.68371 0.0 18.2312    
cufflinks 15.1371 0.0 39.2525    
cufflinks 20.9633 0.0 54.1881   High

0 Strain