Gene : Phvul.009G166800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13780:SF36 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-1 Genomic Order:  1709
Name:  ? Phvul.009G166800 Secondary Identifier:  ? PAC:37150166
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G166800 0.5kb upstream 0.5kb upstream 4163 true Chr09: 24826259-24830421 Phaseolus vulgaris
Phvul.009G166800 0.5kb upstream 0.5kb upstream 500 false Chr09: 24829922-24830421 Phaseolus vulgaris
Phvul.009G166800 0.5kb downstream 0.5kb downstream 4163 true Chr09: 24825759-24829921 Phaseolus vulgaris
Phvul.009G166800 0.5kb downstream 0.5kb downstream 500 false Chr09: 24825759-24826258 Phaseolus vulgaris
Phvul.009G166800 1.0kb upstream 1.0kb upstream 4663 true Chr09: 24826259-24830921 Phaseolus vulgaris
Phvul.009G166800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24829922-24830921 Phaseolus vulgaris
Phvul.009G166800 1.0kb downstream 1.0kb downstream 4663 true Chr09: 24825259-24829921 Phaseolus vulgaris
Phvul.009G166800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24825259-24826258 Phaseolus vulgaris
Phvul.009G166800 2.0kb upstream 2.0kb upstream 5663 true Chr09: 24826259-24831921 Phaseolus vulgaris
Phvul.009G166800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24829922-24831921 Phaseolus vulgaris
Phvul.009G166800 2.0kb downstream 2.0kb downstream 5663 true Chr09: 24824259-24829921 Phaseolus vulgaris
Phvul.009G166800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24824259-24826258 Phaseolus vulgaris
Phvul.009G166800 5.0kb upstream 5.0kb upstream 8663 true Chr09: 24826259-24834921 Phaseolus vulgaris
Phvul.009G166800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24829922-24834921 Phaseolus vulgaris
Phvul.009G166800 5.0kb downstream 5.0kb downstream 8663 true Chr09: 24821259-24829921 Phaseolus vulgaris
Phvul.009G166800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24821259-24826258 Phaseolus vulgaris
Phvul.009G166800 10.0kb upstream 10.0kb upstream 13663 true Chr09: 24826259-24839921 Phaseolus vulgaris
Phvul.009G166800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24829922-24839921 Phaseolus vulgaris
Phvul.009G166800 10.0kb downstream 10.0kb downstream 13663 true Chr09: 24816259-24829921 Phaseolus vulgaris
Phvul.009G166800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24816259-24826258 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314205 5265 Fabidae View MSA
124068322 5270 Rosid View MSA
123743835 5271 Pentapetalae View MSA
122791351 5272 Eudicot View MSA
122045346 5273 Angiosperm View MSA
121348243 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.3557 0.0 196.232 High High
cufflinks 21.7967 0.0 56.345    
cufflinks 11.2708 0.0 29.7532    
cufflinks 10.7397 0.0 28.6223    
cufflinks 18.1944 0.0 47.1761    
cufflinks 3.80381 0.0 11.0762   Low
cufflinks 7.05955 0.0 19.3748    
cufflinks 5.31134 0.0 14.9102    
cufflinks 24.3011 0.0 62.8191    
cufflinks 21.4735 0.0 55.5149    
cufflinks 4.274 0.0 12.341   Low

0 Strain