Gene : Phvul.009G169000 P. vulgaris v2.1
Defline:  (1 of 1) 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Genomic Order:  1731
Name:  ? Phvul.009G169000 Secondary Identifier:  ? PAC:37149637
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G169000 0.5kb upstream 0.5kb upstream 2499 true Chr09: 25141093-25143591 Phaseolus vulgaris
Phvul.009G169000 0.5kb upstream 0.5kb upstream 500 false Chr09: 25141093-25141592 Phaseolus vulgaris
Phvul.009G169000 0.5kb downstream 0.5kb downstream 2499 true Chr09: 25141593-25144091 Phaseolus vulgaris
Phvul.009G169000 0.5kb downstream 0.5kb downstream 500 false Chr09: 25143592-25144091 Phaseolus vulgaris
Phvul.009G169000 1.0kb upstream 1.0kb upstream 2999 true Chr09: 25140593-25143591 Phaseolus vulgaris
Phvul.009G169000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25140593-25141592 Phaseolus vulgaris
Phvul.009G169000 1.0kb downstream 1.0kb downstream 2999 true Chr09: 25141593-25144591 Phaseolus vulgaris
Phvul.009G169000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25143592-25144591 Phaseolus vulgaris
Phvul.009G169000 2.0kb upstream 2.0kb upstream 3999 true Chr09: 25139593-25143591 Phaseolus vulgaris
Phvul.009G169000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25139593-25141592 Phaseolus vulgaris
Phvul.009G169000 2.0kb downstream 2.0kb downstream 3999 true Chr09: 25141593-25145591 Phaseolus vulgaris
Phvul.009G169000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25143592-25145591 Phaseolus vulgaris
Phvul.009G169000 5.0kb upstream 5.0kb upstream 6999 true Chr09: 25136593-25143591 Phaseolus vulgaris
Phvul.009G169000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25136593-25141592 Phaseolus vulgaris
Phvul.009G169000 5.0kb downstream 5.0kb downstream 6999 true Chr09: 25141593-25148591 Phaseolus vulgaris
Phvul.009G169000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25143592-25148591 Phaseolus vulgaris
Phvul.009G169000 10.0kb upstream 10.0kb upstream 11999 true Chr09: 25131593-25143591 Phaseolus vulgaris
Phvul.009G169000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25131593-25141592 Phaseolus vulgaris
Phvul.009G169000 10.0kb downstream 10.0kb downstream 11999 true Chr09: 25141593-25153591 Phaseolus vulgaris
Phvul.009G169000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25143592-25153591 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308896 5265 Fabidae View MSA
124062342 5270 Rosid View MSA
123740173 5271 Pentapetalae View MSA
122786223 5272 Eudicot View MSA
122048362 5273 Angiosperm View MSA
121344861 5274 Embryophyte View MSA
123424755 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.68964 0.0 5.41038    
cufflinks 1.71826 0.0 5.52074    
cufflinks 3.82059 0.0 11.198   High
cufflinks 1.62157 0.0 5.24476    
cufflinks 2.40982 0.0 7.42851    
cufflinks 3.14185 0.0 9.41504   High
cufflinks 1.47597 0.0 4.79528    
cufflinks 1.55676 0.0 5.04893    
cufflinks 1.27881 0.0 4.2348   Low
cufflinks 2.55372 0.0 7.85324    
cufflinks 2.03547 0.0 6.40585    

0 Strain