Gene : Phvul.008G028900 P. vulgaris v2.1
Defline:  (1 of 5) K13379 - reversibly glycosylated polypeptide / UDP-arabinopyranose mutase (RGP, UTM) Genomic Order:  296
Name:  ? Phvul.008G028900 Secondary Identifier:  ? PAC:37157878
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G028900 0.5kb upstream 0.5kb upstream 2948 true Chr08: 2332314-2335261 Phaseolus vulgaris
Phvul.008G028900 0.5kb upstream 0.5kb upstream 500 false Chr08: 2332314-2332813 Phaseolus vulgaris
Phvul.008G028900 0.5kb downstream 0.5kb downstream 2948 true Chr08: 2332814-2335761 Phaseolus vulgaris
Phvul.008G028900 0.5kb downstream 0.5kb downstream 500 false Chr08: 2335262-2335761 Phaseolus vulgaris
Phvul.008G028900 1.0kb upstream 1.0kb upstream 3448 true Chr08: 2331814-2335261 Phaseolus vulgaris
Phvul.008G028900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2331814-2332813 Phaseolus vulgaris
Phvul.008G028900 1.0kb downstream 1.0kb downstream 3448 true Chr08: 2332814-2336261 Phaseolus vulgaris
Phvul.008G028900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2335262-2336261 Phaseolus vulgaris
Phvul.008G028900 2.0kb upstream 2.0kb upstream 4448 true Chr08: 2330814-2335261 Phaseolus vulgaris
Phvul.008G028900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2330814-2332813 Phaseolus vulgaris
Phvul.008G028900 2.0kb downstream 2.0kb downstream 4448 true Chr08: 2332814-2337261 Phaseolus vulgaris
Phvul.008G028900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2335262-2337261 Phaseolus vulgaris
Phvul.008G028900 5.0kb upstream 5.0kb upstream 7448 true Chr08: 2327814-2335261 Phaseolus vulgaris
Phvul.008G028900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2327814-2332813 Phaseolus vulgaris
Phvul.008G028900 5.0kb downstream 5.0kb downstream 7448 true Chr08: 2332814-2340261 Phaseolus vulgaris
Phvul.008G028900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2335262-2340261 Phaseolus vulgaris
Phvul.008G028900 10.0kb upstream 10.0kb upstream 12448 true Chr08: 2322814-2335261 Phaseolus vulgaris
Phvul.008G028900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2322814-2332813 Phaseolus vulgaris
Phvul.008G028900 10.0kb downstream 10.0kb downstream 12448 true Chr08: 2332814-2345261 Phaseolus vulgaris
Phvul.008G028900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2335262-2345261 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310399 5265 Fabidae View MSA
124072741 5270 Rosid View MSA
123747058 5271 Pentapetalae View MSA
122796837 5272 Eudicot View MSA
122049597 5273 Angiosperm View MSA
121348829 5274 Embryophyte View MSA
123424490 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.5313 0.0 125.979 High High
cufflinks 27.12 0.0 70.3343    
cufflinks 3.52922 0.0 10.8757   Low
cufflinks 85.3097 0.0 228.604 High High
cufflinks 12.7008 0.0 34.4341    
cufflinks 14.8429 0.0 39.7608    
cufflinks 17.6194 0.0 46.6715    
cufflinks 17.2109 0.0 45.653    
cufflinks 31.6529 0.0 81.8827 High  
cufflinks 5.06506 0.0 15.0215   Low
cufflinks 27.5307 0.0 71.4285    

0 Strain