Gene : Phvul.008G028700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33417:SF1 - B12D PROTEIN Genomic Order:  294
Name:  ? Phvul.008G028700 Secondary Identifier:  ? PAC:37159242
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G028700 0.5kb upstream 0.5kb upstream 1456 true Chr08: 2304900-2306355 Phaseolus vulgaris
Phvul.008G028700 0.5kb upstream 0.5kb upstream 500 false Chr08: 2304900-2305399 Phaseolus vulgaris
Phvul.008G028700 0.5kb downstream 0.5kb downstream 1456 true Chr08: 2305400-2306855 Phaseolus vulgaris
Phvul.008G028700 0.5kb downstream 0.5kb downstream 500 false Chr08: 2306356-2306855 Phaseolus vulgaris
Phvul.008G028700 1.0kb upstream 1.0kb upstream 1956 true Chr08: 2304400-2306355 Phaseolus vulgaris
Phvul.008G028700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2304400-2305399 Phaseolus vulgaris
Phvul.008G028700 1.0kb downstream 1.0kb downstream 1956 true Chr08: 2305400-2307355 Phaseolus vulgaris
Phvul.008G028700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2306356-2307355 Phaseolus vulgaris
Phvul.008G028700 2.0kb upstream 2.0kb upstream 2956 true Chr08: 2303400-2306355 Phaseolus vulgaris
Phvul.008G028700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2303400-2305399 Phaseolus vulgaris
Phvul.008G028700 2.0kb downstream 2.0kb downstream 2956 true Chr08: 2305400-2308355 Phaseolus vulgaris
Phvul.008G028700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2306356-2308355 Phaseolus vulgaris
Phvul.008G028700 5.0kb upstream 5.0kb upstream 5956 true Chr08: 2300400-2306355 Phaseolus vulgaris
Phvul.008G028700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2300400-2305399 Phaseolus vulgaris
Phvul.008G028700 5.0kb downstream 5.0kb downstream 5956 true Chr08: 2305400-2311355 Phaseolus vulgaris
Phvul.008G028700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2306356-2311355 Phaseolus vulgaris
Phvul.008G028700 10.0kb upstream 10.0kb upstream 10956 true Chr08: 2295400-2306355 Phaseolus vulgaris
Phvul.008G028700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2295400-2305399 Phaseolus vulgaris
Phvul.008G028700 10.0kb downstream 10.0kb downstream 10956 true Chr08: 2305400-2316355 Phaseolus vulgaris
Phvul.008G028700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2306356-2316355 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304540 5265 Fabidae View MSA
124062890 5270 Rosid View MSA
123738615 5271 Pentapetalae View MSA
122769927 5272 Eudicot View MSA
122048114 5273 Angiosperm View MSA
121310851 5274 Embryophyte View MSA
123348236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.39129 0.0 8.6433    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.3819 0.0 45.1315    
cufflinks 247.561 0.0 665.745 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.361854 0.0 1.53407    
cufflinks 0.148868 0.0 0.685862 Low Low

0 Strain