Gene : Phvul.008G033300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11802:SF43 - SERINE CARBOXYPEPTIDASE-LIKE 25 Genomic Order:  345
Name:  ? Phvul.008G033300 Secondary Identifier:  ? PAC:37158698
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G033300 0.5kb upstream 0.5kb upstream 6054 true Chr08: 2707950-2714003 Phaseolus vulgaris
Phvul.008G033300 0.5kb upstream 0.5kb upstream 500 false Chr08: 2707950-2708449 Phaseolus vulgaris
Phvul.008G033300 0.5kb downstream 0.5kb downstream 6054 true Chr08: 2708450-2714503 Phaseolus vulgaris
Phvul.008G033300 0.5kb downstream 0.5kb downstream 500 false Chr08: 2714004-2714503 Phaseolus vulgaris
Phvul.008G033300 1.0kb upstream 1.0kb upstream 6554 true Chr08: 2707450-2714003 Phaseolus vulgaris
Phvul.008G033300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2707450-2708449 Phaseolus vulgaris
Phvul.008G033300 1.0kb downstream 1.0kb downstream 6554 true Chr08: 2708450-2715003 Phaseolus vulgaris
Phvul.008G033300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2714004-2715003 Phaseolus vulgaris
Phvul.008G033300 2.0kb upstream 2.0kb upstream 7554 true Chr08: 2706450-2714003 Phaseolus vulgaris
Phvul.008G033300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2706450-2708449 Phaseolus vulgaris
Phvul.008G033300 2.0kb downstream 2.0kb downstream 7554 true Chr08: 2708450-2716003 Phaseolus vulgaris
Phvul.008G033300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2714004-2716003 Phaseolus vulgaris
Phvul.008G033300 5.0kb upstream 5.0kb upstream 10554 true Chr08: 2703450-2714003 Phaseolus vulgaris
Phvul.008G033300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2703450-2708449 Phaseolus vulgaris
Phvul.008G033300 5.0kb downstream 5.0kb downstream 10554 true Chr08: 2708450-2719003 Phaseolus vulgaris
Phvul.008G033300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2714004-2719003 Phaseolus vulgaris
Phvul.008G033300 10.0kb upstream 10.0kb upstream 15554 true Chr08: 2698450-2714003 Phaseolus vulgaris
Phvul.008G033300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2698450-2708449 Phaseolus vulgaris
Phvul.008G033300 10.0kb downstream 10.0kb downstream 15554 true Chr08: 2708450-2724003 Phaseolus vulgaris
Phvul.008G033300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2714004-2724003 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307226 5265 Fabidae View MSA
124064863 5270 Rosid View MSA
123740378 5271 Pentapetalae View MSA
122786591 5272 Eudicot View MSA
122047242 5273 Angiosperm View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.28948 0.0 26.1524    
cufflinks 5.31177 0.0 23.6686    
cufflinks 4.10723 0.0 17.6986    
cufflinks 26.2334 0.0 90.5079   High
cufflinks 4.98985 0.0 20.1838    
cufflinks 23.8897 0.0 78.3256   High
cufflinks 1.96354 0.0 9.58824    
cufflinks 0.933301 0.0 5.51382   Low
cufflinks 1.46583 0.0 8.23068    
cufflinks 0.757153 0.0 5.09578   Low
cufflinks 12.18 0.0 44.5175    

0 Strain