Gene : Phvul.008G032900 P. vulgaris v2.1
Defline:  (1 of 4) PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Genomic Order:  341
Name:  ? Phvul.008G032900 Secondary Identifier:  ? PAC:37160240
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G032900 0.5kb upstream 0.5kb upstream 3837 true Chr08: 2654884-2658720 Phaseolus vulgaris
Phvul.008G032900 0.5kb upstream 0.5kb upstream 500 false Chr08: 2654884-2655383 Phaseolus vulgaris
Phvul.008G032900 0.5kb downstream 0.5kb downstream 3837 true Chr08: 2655384-2659220 Phaseolus vulgaris
Phvul.008G032900 0.5kb downstream 0.5kb downstream 500 false Chr08: 2658721-2659220 Phaseolus vulgaris
Phvul.008G032900 1.0kb upstream 1.0kb upstream 4337 true Chr08: 2654384-2658720 Phaseolus vulgaris
Phvul.008G032900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2654384-2655383 Phaseolus vulgaris
Phvul.008G032900 1.0kb downstream 1.0kb downstream 4337 true Chr08: 2655384-2659720 Phaseolus vulgaris
Phvul.008G032900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2658721-2659720 Phaseolus vulgaris
Phvul.008G032900 2.0kb upstream 2.0kb upstream 5337 true Chr08: 2653384-2658720 Phaseolus vulgaris
Phvul.008G032900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2653384-2655383 Phaseolus vulgaris
Phvul.008G032900 2.0kb downstream 2.0kb downstream 5337 true Chr08: 2655384-2660720 Phaseolus vulgaris
Phvul.008G032900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2658721-2660720 Phaseolus vulgaris
Phvul.008G032900 5.0kb upstream 5.0kb upstream 8337 true Chr08: 2650384-2658720 Phaseolus vulgaris
Phvul.008G032900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2650384-2655383 Phaseolus vulgaris
Phvul.008G032900 5.0kb downstream 5.0kb downstream 8337 true Chr08: 2655384-2663720 Phaseolus vulgaris
Phvul.008G032900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2658721-2663720 Phaseolus vulgaris
Phvul.008G032900 10.0kb upstream 10.0kb upstream 13337 true Chr08: 2645384-2658720 Phaseolus vulgaris
Phvul.008G032900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2645384-2655383 Phaseolus vulgaris
Phvul.008G032900 10.0kb downstream 10.0kb downstream 13337 true Chr08: 2655384-2668720 Phaseolus vulgaris
Phvul.008G032900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2658721-2668720 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315194 5265 Fabidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6114 0.0 30.5051   High
cufflinks 8.49158 0.0 22.7753    
cufflinks 1.08889 0.0 3.62473   Low
cufflinks 11.022 0.0 29.069   High
cufflinks 6.24746 0.0 17.1908    
cufflinks 4.10172 0.0 11.7312    
cufflinks 5.52881 0.0 15.2683    
cufflinks 9.90268 0.0 26.2429    
cufflinks 4.02713 0.0 11.4532    
cufflinks 4.48548 0.0 12.7497    
cufflinks 6.12904 0.0 16.8464    

0 Strain