Gene : Phvul.008G031580 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31680:SF4 - PROTEIN LONGIFOLIA 1-RELATED Genomic Order:  325
Name:  ? Phvul.008G031580 Secondary Identifier:  ? PAC:37159486
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G031580 0.5kb upstream 0.5kb upstream 5719 true Chr08: 2537045-2542763 Phaseolus vulgaris
Phvul.008G031580 0.5kb upstream 0.5kb upstream 500 false Chr08: 2537045-2537544 Phaseolus vulgaris
Phvul.008G031580 0.5kb downstream 0.5kb downstream 5719 true Chr08: 2537545-2543263 Phaseolus vulgaris
Phvul.008G031580 0.5kb downstream 0.5kb downstream 500 false Chr08: 2542764-2543263 Phaseolus vulgaris
Phvul.008G031580 1.0kb upstream 1.0kb upstream 6219 true Chr08: 2536545-2542763 Phaseolus vulgaris
Phvul.008G031580 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2536545-2537544 Phaseolus vulgaris
Phvul.008G031580 1.0kb downstream 1.0kb downstream 6219 true Chr08: 2537545-2543763 Phaseolus vulgaris
Phvul.008G031580 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2542764-2543763 Phaseolus vulgaris
Phvul.008G031580 2.0kb upstream 2.0kb upstream 7219 true Chr08: 2535545-2542763 Phaseolus vulgaris
Phvul.008G031580 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2535545-2537544 Phaseolus vulgaris
Phvul.008G031580 2.0kb downstream 2.0kb downstream 7219 true Chr08: 2537545-2544763 Phaseolus vulgaris
Phvul.008G031580 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2542764-2544763 Phaseolus vulgaris
Phvul.008G031580 5.0kb upstream 5.0kb upstream 10219 true Chr08: 2532545-2542763 Phaseolus vulgaris
Phvul.008G031580 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2532545-2537544 Phaseolus vulgaris
Phvul.008G031580 5.0kb downstream 5.0kb downstream 10219 true Chr08: 2537545-2547763 Phaseolus vulgaris
Phvul.008G031580 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2542764-2547763 Phaseolus vulgaris
Phvul.008G031580 10.0kb upstream 10.0kb upstream 15219 true Chr08: 2527545-2542763 Phaseolus vulgaris
Phvul.008G031580 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2527545-2537544 Phaseolus vulgaris
Phvul.008G031580 10.0kb downstream 10.0kb downstream 15219 true Chr08: 2537545-2552763 Phaseolus vulgaris
Phvul.008G031580 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2542764-2552763 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026676 5273 Angiosperm View MSA
122316112 5265 Fabidae View MSA
124071879 5270 Rosid View MSA
123746189 5271 Pentapetalae View MSA
122771811 5272 Eudicot View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.00144 0.0 3.21031   Low
cufflinks 6.13516 0.0 16.3546   High
cufflinks 1.78959 0.0 5.3447    
cufflinks 3.55892 0.0 9.97501    
cufflinks 1.5406 0.0 4.74903   Low
cufflinks 4.08035 0.0 11.2434    
cufflinks 2.60212 0.0 7.47025    
cufflinks 7.0103 0.0 18.4444   High
cufflinks 6.34973 0.0 16.8625   High
cufflinks 2.19243 0.0 6.4352    
cufflinks 2.62685 0.0 7.59141    

0 Strain