Gene : Phvul.008G040700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  422
Name:  ? Phvul.008G040700 Secondary Identifier:  ? PAC:37161113
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G040700 0.5kb upstream 0.5kb upstream 1973 true Chr08: 3364766-3366738 Phaseolus vulgaris
Phvul.008G040700 0.5kb upstream 0.5kb upstream 500 false Chr08: 3366239-3366738 Phaseolus vulgaris
Phvul.008G040700 0.5kb downstream 0.5kb downstream 1973 true Chr08: 3364266-3366238 Phaseolus vulgaris
Phvul.008G040700 0.5kb downstream 0.5kb downstream 500 false Chr08: 3364266-3364765 Phaseolus vulgaris
Phvul.008G040700 1.0kb upstream 1.0kb upstream 2473 true Chr08: 3364766-3367238 Phaseolus vulgaris
Phvul.008G040700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3366239-3367238 Phaseolus vulgaris
Phvul.008G040700 1.0kb downstream 1.0kb downstream 2473 true Chr08: 3363766-3366238 Phaseolus vulgaris
Phvul.008G040700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3363766-3364765 Phaseolus vulgaris
Phvul.008G040700 2.0kb upstream 2.0kb upstream 3473 true Chr08: 3364766-3368238 Phaseolus vulgaris
Phvul.008G040700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3366239-3368238 Phaseolus vulgaris
Phvul.008G040700 2.0kb downstream 2.0kb downstream 3473 true Chr08: 3362766-3366238 Phaseolus vulgaris
Phvul.008G040700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3362766-3364765 Phaseolus vulgaris
Phvul.008G040700 5.0kb upstream 5.0kb upstream 6473 true Chr08: 3364766-3371238 Phaseolus vulgaris
Phvul.008G040700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3366239-3371238 Phaseolus vulgaris
Phvul.008G040700 5.0kb downstream 5.0kb downstream 6473 true Chr08: 3359766-3366238 Phaseolus vulgaris
Phvul.008G040700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3359766-3364765 Phaseolus vulgaris
Phvul.008G040700 10.0kb upstream 10.0kb upstream 11473 true Chr08: 3364766-3376238 Phaseolus vulgaris
Phvul.008G040700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3366239-3376238 Phaseolus vulgaris
Phvul.008G040700 10.0kb downstream 10.0kb downstream 11473 true Chr08: 3354766-3366238 Phaseolus vulgaris
Phvul.008G040700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3354766-3364765 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315715 5265 Fabidae View MSA
124039926 5270 Rosid View MSA
123741277 5271 Pentapetalae View MSA
122770029 5272 Eudicot View MSA
122050905 5273 Angiosperm View MSA
121349854 5274 Embryophyte View MSA
123381472 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0390228 0.0 0.193397 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0751353 0.0 0.349014 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain