Gene : Phvul.008G039900 P. vulgaris v2.1
Defline:  (1 of 91) PF03106 - WRKY DNA -binding domain (WRKY) Genomic Order:  413
Name:  ? Phvul.008G039900 Secondary Identifier:  ? PAC:37159521
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G039900 0.5kb upstream 0.5kb upstream 5009 true Chr08: 3302082-3307090 Phaseolus vulgaris
Phvul.008G039900 0.5kb upstream 0.5kb upstream 500 false Chr08: 3306591-3307090 Phaseolus vulgaris
Phvul.008G039900 0.5kb downstream 0.5kb downstream 5009 true Chr08: 3301582-3306590 Phaseolus vulgaris
Phvul.008G039900 0.5kb downstream 0.5kb downstream 500 false Chr08: 3301582-3302081 Phaseolus vulgaris
Phvul.008G039900 1.0kb upstream 1.0kb upstream 5509 true Chr08: 3302082-3307590 Phaseolus vulgaris
Phvul.008G039900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3306591-3307590 Phaseolus vulgaris
Phvul.008G039900 1.0kb downstream 1.0kb downstream 5509 true Chr08: 3301082-3306590 Phaseolus vulgaris
Phvul.008G039900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3301082-3302081 Phaseolus vulgaris
Phvul.008G039900 2.0kb upstream 2.0kb upstream 6509 true Chr08: 3302082-3308590 Phaseolus vulgaris
Phvul.008G039900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3306591-3308590 Phaseolus vulgaris
Phvul.008G039900 2.0kb downstream 2.0kb downstream 6509 true Chr08: 3300082-3306590 Phaseolus vulgaris
Phvul.008G039900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3300082-3302081 Phaseolus vulgaris
Phvul.008G039900 5.0kb upstream 5.0kb upstream 9509 true Chr08: 3302082-3311590 Phaseolus vulgaris
Phvul.008G039900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3306591-3311590 Phaseolus vulgaris
Phvul.008G039900 5.0kb downstream 5.0kb downstream 9509 true Chr08: 3297082-3306590 Phaseolus vulgaris
Phvul.008G039900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3297082-3302081 Phaseolus vulgaris
Phvul.008G039900 10.0kb upstream 10.0kb upstream 14509 true Chr08: 3302082-3316590 Phaseolus vulgaris
Phvul.008G039900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3306591-3316590 Phaseolus vulgaris
Phvul.008G039900 10.0kb downstream 10.0kb downstream 14509 true Chr08: 3292082-3306590 Phaseolus vulgaris
Phvul.008G039900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3292082-3302081 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306351 5265 Fabidae View MSA
124070868 5270 Rosid View MSA
123742422 5271 Pentapetalae View MSA
122788508 5272 Eudicot View MSA
122041677 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.0024 0.0 127.721 High High
cufflinks 19.5706 0.0 50.6186    
cufflinks 18.2155 0.0 47.1502    
cufflinks 11.7863 0.0 30.9918   Low
cufflinks 15.9034 0.0 41.2953    
cufflinks 15.2184 0.0 39.569    
cufflinks 17.6298 0.0 45.6283    
cufflinks 13.0009 0.0 33.9552    
cufflinks 18.5988 0.0 48.1042    
cufflinks 36.8428 0.0 96.3922 High High
cufflinks 13.9479 0.0 36.4022    

0 Strain